RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 MBD3L3A6NE82 208 aaPredicted RBP5.53□□□□□ -1.52
LINC01043-201ENST00000565936 MBD3L5A6NJ08 208 aaPredicted RBP5.53□□□□□ -1.52
LINC01043-201ENST00000565936 RHBDL1O75783 438 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 IGHG3P01860 377 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 MAS1LP35410 378 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 HCP5Q6MZN7 132 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 TEX261Q6UWH6 196 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 GBGT1Q8N5D6 347 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 MBD3L2Q8NHZ7 208 aaPredicted RBP5.53□□□□□ -1.52
LINC01043-201ENST00000565936 PARD6AQ9NPB6 346 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 SIRT4Q9Y6E7 314 aaPredicted RBP5.53□□□□□ -1.52
LINC01043-201ENST00000565936 V9GYH0 126 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 RBFOX3A6NFN3 312 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 C1QCP02747 245 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 MBNL2Q5VZF2 373 aaKnown RBP5.53□□□□□ -1.52
LINC01043-201ENST00000565936 SH3BGRL3Q9H299 93 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 NAT8BQ9UHF3 227 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 IGHV1-18A0A0C4DH31 117 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 MARCH11A6NNE9 402 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 TMEM14DPA8MWL7 114 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 THY1P04216 161 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 SFTA3P0C7M3 94 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 LRRC75AQ8NAA5 344 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 MIXL1Q9H2W2 232 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 ELOA3CA0A087WX78 387 aaPredicted RBP5.53□□□□□ -1.52
LINC01043-201ENST00000565936 LOC102723971A0A1B0GUV8 181 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 B4DEV8 164 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 B4DSR2 109 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 OR10J1P30954 320 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 TFPI2P48307 235 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 ZNF385CQ66K41 422 aaPredicted RBP5.53□□□□□ -1.52
LINC01043-201ENST00000565936 PPP1R27Q86WC6 154 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 TM2D1Q9BX74 207 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 MRPL37Q9BZE1 423 aaKnown RBP5.53□□□□□ -1.52
LINC01043-201ENST00000565936 NYNRINQ9P2P1 1898 aaKnown RBP5.53□□□□□ -1.52
LINC01043-201ENST00000565936 PROB1E7EW31 1015 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 SEC11BP0C7V7 166 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 LINC00869P0C866 280 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 FAM157CP0CG43 387 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 SPANXN1Q5VSR9 72 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 CD200R1LQ6Q8B3 271 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 WFDC6Q9BQY6 131 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 MRPL13Q9BYD1 178 aaKnown RBP5.53□□□□□ -1.52
LINC01043-201ENST00000565936 NXF2Q9GZY0 626 aaKnown RBP5.53□□□□□ -1.52
LINC01043-201ENST00000565936 RBKSQ9H477 322 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 ANK1P16157 1881 aa5.53□□□□□ -1.52
LINC01043-201ENST00000565936 PLXNA3P51805 1871 aa5.52□□□□□ -1.52
LINC01043-201ENST00000565936 NDUFS8O00217 210 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 MYOD1P15172 320 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 NPBWR2P48146 333 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 RPS20P60866 119 aaKnown RBP5.52□□□□□ -1.53
LINC01043-201ENST00000565936 TMEM255AQ5JRV8 349 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 CLLU1Q5K131 121 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 PQLC2Q6ZP29 291 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 FBLIM1Q8WUP2 373 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 MS4A10Q96PG2 267 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 TNFSF18Q9UNG2 199 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 PXMP4Q9Y6I8 212 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 IGHV3-21A0A0B4J1V1 117 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 PINLYPA6NC86 204 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 ADAM11O75078 769 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 AREGP15514 252 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 SPNP16150 400 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 RCC1P18754 421 aaPredicted RBP5.52□□□□□ -1.53
LINC01043-201ENST00000565936 ZNF137PP52743 207 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 CLEC12BQ2HXU8 276 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 IGFL3Q6UXB1 125 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 GPR132Q9UNW8 380 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 CBY1Q9Y3M2 126 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 SRSF10O75494 262 aaKnown RBP5.52□□□□□ -1.53
LINC01043-201ENST00000565936 DLX6P56179 175 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 CMC4P56277 68 aaPredicted RBP5.52□□□□□ -1.53
LINC01043-201ENST00000565936 HLA-DRB5Q30154 266 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 KLHDC1Q8N7A1 406 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 OR10G8Q8NGN5 311 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 GPR61Q9BZJ8 451 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 NPIPB6E9PJ23 425 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 IGKV1D-33P01593 117 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 IGKV1-33P01594 117 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 SCGB1C2P0DMR2 95 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 RND2P52198 227 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 HERVK_113P61574 105 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 FOXB2Q5VYV0 432 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 COLCA1Q6ZS62 124 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 C11orf42Q8N5U0 333 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 FAM169BQ8N8A8 192 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 PRSS33Q8NF86 280 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 ARPC1AQ92747 370 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 SLC25A28Q96A46 364 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 TRAV20A0A0B4J274 112 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 J3KRW8 73 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 RGS13O14921 159 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 ERVS71-1P61550 626 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 WFIKKN1Q96NZ8 548 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 MRPL32Q9BYC8 188 aaKnown RBP5.52□□□□□ -1.53
LINC01043-201ENST00000565936 SVILO95425 2214 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 AHCTF1Q8WYP5 2266 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 PQLC2LA1A4F0 135 aa5.52□□□□□ -1.53
LINC01043-201ENST00000565936 PTBP3O95758 552 aaKnown RBP5.52□□□□□ -1.53
LINC01043-201ENST00000565936 MGPP08493 103 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms