RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 RBPMSQ93062 196 aaKnown RBP1.72□□□□□ -2.13
UBR1-205ENST00000564540 TRIB3Q96RU7 358 aa1.72□□□□□ -2.13
UBR1-205ENST00000564540 KLF6Q99612 283 aaPredicted RBP1.72□□□□□ -2.13
UBR1-205ENST00000564540 SIGMAR1Q99720 223 aa1.72□□□□□ -2.13
UBR1-205ENST00000564540 GABARAPL1Q9H0R8 117 aa1.72□□□□□ -2.13
UBR1-205ENST00000564540 DCSTAMPQ9H295 470 aa1.72□□□□□ -2.13
UBR1-205ENST00000564540 KCNIP2Q9NS61 270 aa1.72□□□□□ -2.13
UBR1-205ENST00000564540 MRPL27Q9P0M9 148 aaKnown RBP1.72□□□□□ -2.13
UBR1-205ENST00000564540 DNAJC12Q9UKB3 198 aa1.72□□□□□ -2.13
UBR1-205ENST00000564540 VPREB3Q9UKI3 123 aa1.72□□□□□ -2.13
UBR1-205ENST00000564540 WASHC3Q9Y3C0 194 aa1.72□□□□□ -2.13
UBR1-205ENST00000564540 PXMP4Q9Y6I8 212 aa1.72□□□□□ -2.13
UBR1-205ENST00000564540 EIF3AQ14152 1382 aaKnown RBP1.72□□□□□ -2.13
UBR1-205ENST00000564540 NAV1Q8NEY1 1877 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 MYO5BQ9ULV0 1848 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 OR4C46A6NHA9 309 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 ZNF729A6NN14 1252 aaPredicted RBP1.71□□□□□ -2.14
UBR1-205ENST00000564540 DISC1C4P0D8 188 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 NOS1APO75052 506 aaPredicted RBP1.71□□□□□ -2.14
UBR1-205ENST00000564540 GPR75O95800 540 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 IGKV1D-33P01593 117 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 IGKV1-33P01594 117 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 IGLV7-43P04211 117 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 FGF6P10767 208 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 CD79AP11912 226 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 PPP1CCP36873 323 aaKnown RBP1.71□□□□□ -2.14
UBR1-205ENST00000564540 CA7P43166 264 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 KRR1Q13601 381 aaKnown RBP1.71□□□□□ -2.14
UBR1-205ENST00000564540 CDK10Q15131 360 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 SNCBQ16143 134 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 LYG2Q86SG7 212 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 SLC35F6Q8N357 371 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 OR2T27Q8NH04 317 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 LHFPL5Q8TAF8 219 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 NEK7Q8TDX7 302 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 KLK6Q92876 244 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 DCUN1D1Q96GG9 259 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 PYURFQ96I23 114 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 PHB2Q99623 299 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 PKMYT1Q99640 499 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 HOPXQ9BPY8 73 aaPredicted RBP1.71□□□□□ -2.14
UBR1-205ENST00000564540 FKBP14Q9NWM8 211 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 GID8Q9NWU2 228 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 CMTM6Q9NX76 183 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 IDI2-AS1Q9NZ38 188 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 ANAPC10Q9UM13 185 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 COQ4Q9Y3A0 265 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 PHLDA3Q9Y5J5 127 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 R4GN34 69 aa1.71□□□□□ -2.14
UBR1-205ENST00000564540 WRNQ14191 1432 aaPredicted RBP eCLIP1.71□□□□□ -2.14
UBR1-205ENST00000564540 IGKV1OR2-108A0A075B7D4 117 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 PQLC2LA1A4F0 135 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 A6NED7 52 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 LEUTXA8MZ59 168 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 H3BMM0 161 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 J3QKU1 62 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 NACADO15069 1562 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 KLRC4O43908 158 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 APOMO95445 188 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 MT-CO2P00403 227 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 IGHMP01871 453 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 TTRP02766 147 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 GYPCP04921 128 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 HLA-DQB2P05538 268 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 FAM228BP0C875 321 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 HIST1H1TP22492 207 aaPredicted RBP1.7□□□□□ -2.14
UBR1-205ENST00000564540 OPRM1P35372 400 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 FGF12P61328 243 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 BTN3A2P78410 334 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 TNFAIP6P98066 277 aaPredicted RBP1.7□□□□□ -2.14
UBR1-205ENST00000564540 APOFQ13790 326 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 LPCAT3Q6P1A2 487 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 UMODL1-AS1Q8N2C9 162 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 UBE2WQ96B02 151 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 SFRP2Q96HF1 295 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 OR52E6Q96RD3 313 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 NIPSNAP1Q9BPW8 284 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 CXorf21Q9HAI6 301 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 MRPL40Q9NQ50 206 aaKnown RBP1.7□□□□□ -2.14
UBR1-205ENST00000564540 INIPQ9NRY2 104 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 PAQR5Q9NXK6 330 aaPredicted RBP1.7□□□□□ -2.14
UBR1-205ENST00000564540 OR5V1Q9UGF6 321 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 RPUSD1Q9UJJ7 312 aaKnown RBP1.7□□□□□ -2.14
UBR1-205ENST00000564540 FIS1Q9Y3D6 152 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 LINC00588Q9Y4M8 146 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 ICOSQ9Y6W8 199 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 THSD7AQ9UPZ6 1657 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 MTUS2Q5JR59 1369 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 CACNA1GO43497 2377 aa1.7□□□□□ -2.14
UBR1-205ENST00000564540 GRIN2BQ13224 1484 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 ZBED9Q6R2W3 1325 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 FAM236DA0A1B0GTK5 79 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 OR5K4A6NMS3 321 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 OR4C45A6NMZ5 311 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 C2orf74A8MZ97 194 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 OR2B3O76000 313 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 CIAO1O76071 339 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 OR7C1O76099 320 aaPredicted RBP1.69□□□□□ -2.14
UBR1-205ENST00000564540 GUSBP08236 651 aa1.69□□□□□ -2.14
UBR1-205ENST00000564540 FAM236CP0DP71 79 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms