RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 BPESC1Q9GZL8 116 aa14.73□□□□□ -0.05
COMMD4-208ENST00000563220 TMEM133Q9H2Q1 129 aa14.73□□□□□ -0.05
COMMD4-208ENST00000563220 PRELID3BQ9Y3B1 194 aa14.73□□□□□ -0.05
COMMD4-208ENST00000563220 LRRK2Q5S007 2527 aa14.73□□□□□ -0.05
COMMD4-208ENST00000563220 DOCK11Q5JSL3 2073 aa14.72□□□□□ -0.05
COMMD4-208ENST00000563220 E5RGE8 158 aa14.72□□□□□ -0.05
COMMD4-208ENST00000563220 ZNF833PQ6ZTB9 187 aa14.72□□□□□ -0.05
COMMD4-208ENST00000563220 ZNF295-AS1Q8N0V1 137 aa14.72□□□□□ -0.05
COMMD4-208ENST00000563220 NSG2Q9Y328 171 aa14.72□□□□□ -0.05
COMMD4-208ENST00000563220 LOC105371242A0A075B767 164 aa14.72□□□□□ -0.05
COMMD4-208ENST00000563220 A0A1W2PPH5 198 aa14.72□□□□□ -0.05
COMMD4-208ENST00000563220 RBFOX2O43251 390 aaKnown RBP eCLIP14.72□□□□□ -0.05
COMMD4-208ENST00000563220 HPRT1P00492 218 aa14.72□□□□□ -0.05
COMMD4-208ENST00000563220 LIPFP07098 398 aa14.72□□□□□ -0.05
COMMD4-208ENST00000563220 THBS3P49746 956 aa14.72□□□□□ -0.05
COMMD4-208ENST00000563220 OR9G1Q8NH87 305 aa14.72□□□□□ -0.05
COMMD4-208ENST00000563220 LINC00052Q96N35 136 aa14.72□□□□□ -0.05
COMMD4-208ENST00000563220 PLEKHA2Q9HB19 425 aa14.72□□□□□ -0.05
COMMD4-208ENST00000563220 IGHV2-5P01817 119 aa14.71□□□□□ -0.05
COMMD4-208ENST00000563220 ZFP36P26651 326 aaKnown RBP14.71□□□□□ -0.05
COMMD4-208ENST00000563220 RPL12P30050 165 aaKnown RBP14.71□□□□□ -0.05
COMMD4-208ENST00000563220 DIAPH2-AS1Q14236 149 aa14.71□□□□□ -0.05
COMMD4-208ENST00000563220 MIDNQ504T8 468 aa14.71□□□□□ -0.05
COMMD4-208ENST00000563220 OR10X1Q8NGY0 326 aa14.71□□□□□ -0.05
COMMD4-208ENST00000563220 NRGNQ92686 78 aa14.71□□□□□ -0.05
COMMD4-208ENST00000563220 R3HDM4Q96D70 268 aa14.71□□□□□ -0.05
COMMD4-208ENST00000563220 SCO1O75880 301 aa14.7□□□□□ -0.06
COMMD4-208ENST00000563220 ATG12O94817 140 aa14.7□□□□□ -0.06
COMMD4-208ENST00000563220 RBP4P02753 201 aa14.7□□□□□ -0.06
COMMD4-208ENST00000563220 COL8A1P27658 744 aa14.7□□□□□ -0.06
COMMD4-208ENST00000563220 KIR2DS2P43631 304 aa14.7□□□□□ -0.06
COMMD4-208ENST00000563220 Q8N7P7 452 aa14.7□□□□□ -0.06
COMMD4-208ENST00000563220 ADTRPQ96IZ2 230 aa14.7□□□□□ -0.06
COMMD4-208ENST00000563220 ONECUT1Q9UBC0 465 aa14.7□□□□□ -0.06
COMMD4-208ENST00000563220 IGHV2-26A0A0B4J1V2 119 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 MARCH11A6NNE9 402 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 CHST1O43916 411 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 SSSCA1O60232 199 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 TMEM50AO95807 157 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 P2RY1P47900 373 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 PDLIM4P50479 330 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 ARF6P62330 175 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 STOML3Q8TAV4 291 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 ST6GALNAC6Q969X2 333 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 ARPC5LQ9BPX5 153 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 MRPL20Q9BYC9 149 aaKnown RBP14.69□□□□□ -0.06
COMMD4-208ENST00000563220 COA4Q9NYJ1 87 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 REG1BP48304 166 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 LMO4P61968 165 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 CLEC9AQ6UXN8 241 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 H2BFWTQ7Z2G1 175 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 VKORC1L1Q8N0U8 176 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 CLDND2Q8NHS1 167 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 BSCL2Q96G97 398 aaPredicted RBP14.69□□□□□ -0.06
COMMD4-208ENST00000563220 BARX1Q9HBU1 254 aaPredicted RBP14.69□□□□□ -0.06
COMMD4-208ENST00000563220 CYTL1Q9NRR1 136 aa14.69□□□□□ -0.06
COMMD4-208ENST00000563220 PAX9P55771 341 aa14.68□□□□□ -0.06
COMMD4-208ENST00000563220 TUSC1Q2TAM9 212 aa14.68□□□□□ -0.06
COMMD4-208ENST00000563220 SSX9Q7RTT3 188 aa14.68□□□□□ -0.06
COMMD4-208ENST00000563220 OR4S2Q8NH73 311 aa14.68□□□□□ -0.06
COMMD4-208ENST00000563220 TMEM186Q96B77 213 aa14.68□□□□□ -0.06
COMMD4-208ENST00000563220 ZNF471Q9BX82 626 aaPredicted RBP14.68□□□□□ -0.06
COMMD4-208ENST00000563220 ARHGAP32A7KAX9 2087 aa14.68□□□□□ -0.06
COMMD4-208ENST00000563220 FAM24AA6NFZ4 105 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 TOR1AO14656 332 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 IGLV1-47P01700 117 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 OR9G9P0C7N8 305 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 PLA2G2AP14555 144 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 ZNF137PP52743 207 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 ATP5J2P56134 94 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 ZC4H2Q9NQZ6 224 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 hCG_1809904A0A1W2PP81 198 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 A0A1W2PPE2 198 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 A0A1W2PR64 198 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 A0A1W2PRV1 198 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 WRBO00258 174 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 GPR137BO60478 399 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 NQO2P16083 231 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 PVALBP20472 110 aaPredicted RBP14.67□□□□□ -0.06
COMMD4-208ENST00000563220 COX7A1P24310 79 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 OR2C3Q8N628 320 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 CLEC7AQ9BXN2 247 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.67□□□□□ -0.06
COMMD4-208ENST00000563220 SLC35D1Q9NTN3 355 aa14.67□□□□□ -0.06
COMMD4-208ENST00000563220 SPG11Q96JI7 2443 aa14.66□□□□□ -0.06
COMMD4-208ENST00000563220 LOC105371267A0A1B0GV96 52 aa14.66□□□□□ -0.06
COMMD4-208ENST00000563220 IGKV1-16P04430 117 aa14.66□□□□□ -0.06
COMMD4-208ENST00000563220 HLA-DRB5Q30154 266 aa14.66□□□□□ -0.06
COMMD4-208ENST00000563220 GPR157Q5UAW9 335 aa14.66□□□□□ -0.06
COMMD4-208ENST00000563220 FAM71F2Q6NXP2 309 aa14.66□□□□□ -0.06
COMMD4-208ENST00000563220 TNFRSF14Q92956 283 aa14.66□□□□□ -0.06
COMMD4-208ENST00000563220 NABP2Q9BQ15 211 aa14.66□□□□□ -0.06
COMMD4-208ENST00000563220 H0YJW9 148 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 M0R1W7 72 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 SYNGR2O43760 224 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 MMP9P14780 707 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 PRRX1P54821 245 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 VAMP2P63027 116 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 LCN2P80188 198 aa14.65□□□□□ -0.06
COMMD4-208ENST00000563220 TAGLNQ01995 201 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms