RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 HLA-DRB5Q30154 266 aa0.83□□□□□ -2.28
DENND4A-205ENST00000562540 BAP18Q8IXM2 172 aa0.83□□□□□ -2.28
DENND4A-205ENST00000562540 C1orf174Q8IYL3 243 aa0.83□□□□□ -2.28
DENND4A-205ENST00000562540 BOD1L2Q8IYS8 172 aa0.83□□□□□ -2.28
DENND4A-205ENST00000562540 PACRGLQ8N7B6 248 aa0.83□□□□□ -2.28
DENND4A-205ENST00000562540 OR10D3Q8NH80 312 aa0.83□□□□□ -2.28
DENND4A-205ENST00000562540 C12orf43Q96C57 262 aaKnown RBP0.83□□□□□ -2.28
DENND4A-205ENST00000562540 DOHHQ9BU89 302 aa0.83□□□□□ -2.28
DENND4A-205ENST00000562540 VCX3BQ9H321 246 aa0.83□□□□□ -2.28
DENND4A-205ENST00000562540 EMC3Q9P0I2 261 aa0.83□□□□□ -2.28
DENND4A-205ENST00000562540 HDGFL3Q9Y3E1 203 aa0.83□□□□□ -2.28
DENND4A-205ENST00000562540 NCOA6Q14686 2063 aaPredicted RBP0.83□□□□□ -2.28
DENND4A-205ENST00000562540 PTPRSQ13332 1948 aa0.83□□□□□ -2.28
DENND4A-205ENST00000562540 GREB1Q4ZG55 1949 aa0.82□□□□□ -2.28
DENND4A-205ENST00000562540 GRIN2BQ13224 1484 aa0.82□□□□□ -2.28
DENND4A-205ENST00000562540 SMLR1H3BR10 107 aa0.82□□□□□ -2.28
DENND4A-205ENST00000562540 AZIN1O14977 448 aa0.82□□□□□ -2.28
DENND4A-205ENST00000562540 NEMFO60524 1076 aa0.82□□□□□ -2.28
DENND4A-205ENST00000562540 ZNF737O75373 536 aa0.82□□□□□ -2.28
DENND4A-205ENST00000562540 MT-CO2P00403 227 aa0.82□□□□□ -2.28
DENND4A-205ENST00000562540 ORM1P02763 201 aa0.82□□□□□ -2.28
DENND4A-205ENST00000562540 PET100P0DJ07 73 aa0.82□□□□□ -2.28
DENND4A-205ENST00000562540 IFNGR2P38484 337 aa0.82□□□□□ -2.28
DENND4A-205ENST00000562540 ZNF705AQ6ZN79 300 aaPredicted RBP0.82□□□□□ -2.28
DENND4A-205ENST00000562540 OR51T1Q8NGJ9 327 aa0.82□□□□□ -2.28
DENND4A-205ENST00000562540 C10orf105Q8TEF2 133 aa0.82□□□□□ -2.28
DENND4A-205ENST00000562540 CYSTM1Q9H1C7 97 aa0.82□□□□□ -2.28
DENND4A-205ENST00000562540 CHMP4BQ9H444 224 aaKnown RBP0.82□□□□□ -2.28
DENND4A-205ENST00000562540 NRBP2Q9NSY0 501 aa0.82□□□□□ -2.28
DENND4A-205ENST00000562540 SOX21Q9Y651 276 aaPredicted RBP0.82□□□□□ -2.28
DENND4A-205ENST00000562540 DLG5Q8TDM6 1919 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 ROS1P08922 2347 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 A0A087WUU8 490 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 TEX50A0A1B0GTY4 177 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 ERICH2A1L162 156 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 OR6C6A6NF89 314 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 TRPC5OSA6NMA1 111 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 HSBP1L1C9JCN9 74 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 KLRC4O43908 158 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 PGLYRP1O75594 196 aaPredicted RBP0.81□□□□□ -2.28
DENND4A-205ENST00000562540 HLA-DQB2P05538 268 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 MIPP30301 263 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 CD79BP40259 229 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 KRTAP10-4P60372 401 aaPredicted RBP0.81□□□□□ -2.28
DENND4A-205ENST00000562540 FABP5Q01469 135 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 TMEM155Q4W5P6 130 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 TMEM42Q69YG0 159 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 LYZL1Q6UWQ5 148 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 RIBC1Q8N443 379 aaPredicted RBP0.81□□□□□ -2.28
DENND4A-205ENST00000562540 TMA16Q96EY4 203 aaKnown RBP0.81□□□□□ -2.28
DENND4A-205ENST00000562540 Q96M85 177 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 PACRGQ96M98 296 aaPredicted RBP0.81□□□□□ -2.28
DENND4A-205ENST00000562540 TMEM109Q9BVC6 243 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 CFAP45Q9UL16 551 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 TP53TG1Q9Y2A0 90 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 KLK5Q9Y337 293 aaPredicted RBP0.81□□□□□ -2.28
DENND4A-205ENST00000562540 POLR3HQ9Y535 204 aaPredicted RBP0.81□□□□□ -2.28
DENND4A-205ENST00000562540 TIMM9Q9Y5J7 89 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 PCYT1BQ9Y5K3 369 aaPredicted RBP0.81□□□□□ -2.28
DENND4A-205ENST00000562540 NAV1Q8NEY1 1877 aa0.81□□□□□ -2.28
DENND4A-205ENST00000562540 TMEM213A2RRL7 107 aa0.8□□□□□ -2.28
DENND4A-205ENST00000562540 C5orf49A4QMS7 147 aa0.8□□□□□ -2.28
DENND4A-205ENST00000562540 FTCDNL1E5RQL4 147 aa0.8□□□□□ -2.28
DENND4A-205ENST00000562540 F8W036 122 aa0.8□□□□□ -2.28
DENND4A-205ENST00000562540 CREBL2O60519 120 aaPredicted RBP0.8□□□□□ -2.28
DENND4A-205ENST00000562540 TAS2R20P59543 309 aa0.8□□□□□ -2.28
DENND4A-205ENST00000562540 TBPL1P62380 186 aa0.8□□□□□ -2.28
DENND4A-205ENST00000562540 JOSD1Q15040 202 aaPredicted RBP0.8□□□□□ -2.28
DENND4A-205ENST00000562540 MIAQ16674 131 aa0.8□□□□□ -2.28
DENND4A-205ENST00000562540 LRRC26Q2I0M4 334 aa0.8□□□□□ -2.28
DENND4A-205ENST00000562540 LGALS9BQ3B8N2 356 aa0.8□□□□□ -2.28
DENND4A-205ENST00000562540 SDHAF4Q5VUM1 108 aa0.8□□□□□ -2.28
DENND4A-205ENST00000562540 NMNAT3Q96T66 252 aa0.8□□□□□ -2.28
DENND4A-205ENST00000562540 TIPINQ9BVW5 301 aa0.8□□□□□ -2.28
DENND4A-205ENST00000562540 TTTY13Q9BZ97 58 aa0.8□□□□□ -2.28
DENND4A-205ENST00000562540 NDEL1Q9GZM8 345 aa0.8□□□□□ -2.28
DENND4A-205ENST00000562540 NSRP1Q9H0G5 558 aaKnown RBP0.8□□□□□ -2.28
DENND4A-205ENST00000562540 SIPA1L1O43166 1804 aa0.8□□□□□ -2.28
DENND4A-205ENST00000562540 NUP153P49790 1475 aaKnown RBP0.8□□□□□ -2.28
DENND4A-205ENST00000562540 IGKV2-40A0A087WW87 121 aaPredicted RBP0.79□□□□□ -2.28
DENND4A-205ENST00000562540 MEIKINA0A087WXM9 373 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 TMED7-TICAM2A0A0A6YYA0 188 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 TRBV6-5A0A0K0K1A5 114 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 C9JCJ5 164 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 IGKV2D-40P01614 121 aaPredicted RBP0.79□□□□□ -2.28
DENND4A-205ENST00000562540 CRPP02741 224 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 CXCL2P19875 107 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 CXCL3P19876 107 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 ALDH3A1P30838 453 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 AKR1C3P42330 323 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 CLDN12P56749 244 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 AP1S1P61966 158 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 AKR1C1Q04828 323 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 EBPQ15125 230 aaKnown RBP0.79□□□□□ -2.28
DENND4A-205ENST00000562540 SLC36A2Q495M3 483 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 DNM1P34Q6PK57 102 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 KTN1-AS1Q86SY8 53 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 SPATA24Q86W54 205 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 OR1L8Q8NGR8 309 aa0.79□□□□□ -2.28
DENND4A-205ENST00000562540 ZNF675Q8TD23 568 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms