RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 HBZP02008 142 aa11.7□□□□□ -0.54
VPS9D1-202ENST00000561976 AESQ08117 197 aa11.7□□□□□ -0.54
VPS9D1-202ENST00000561976 SGMS2Q8NHU3 365 aa11.7□□□□□ -0.54
VPS9D1-202ENST00000561976 BTF3L4Q96K17 158 aa11.7□□□□□ -0.54
VPS9D1-202ENST00000561976 MS4A10Q96PG2 267 aa11.7□□□□□ -0.54
VPS9D1-202ENST00000561976 SNHG12Q9BXW3 62 aa11.7□□□□□ -0.54
VPS9D1-202ENST00000561976 RYDENQ9NUL5 291 aaKnown RBP11.7□□□□□ -0.54
VPS9D1-202ENST00000561976 CACNA1DQ01668 2161 aa11.7□□□□□ -0.54
VPS9D1-202ENST00000561976 MDFIC2A0A1B0GVS7 189 aa11.7□□□□□ -0.54
VPS9D1-202ENST00000561976 G0S2P27469 103 aa11.7□□□□□ -0.54
VPS9D1-202ENST00000561976 LINC00205P59089 165 aa11.7□□□□□ -0.54
VPS9D1-202ENST00000561976 ERVFC1-1P60608 527 aa11.7□□□□□ -0.54
VPS9D1-202ENST00000561976 RPL15P61313 204 aaKnown RBP11.7□□□□□ -0.54
VPS9D1-202ENST00000561976 NAGKQ9UJ70 344 aa11.7□□□□□ -0.54
VPS9D1-202ENST00000561976 A0A1B0GWJ7 208 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 F6UZH7 168 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 HNF1AP20823 631 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 GCH1P30793 250 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 GABRA2P47869 451 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 ALKBH6Q3KRA9 238 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 CXorf67Q86X51 503 aaPredicted RBP11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 MRGPRDQ8TDS7 321 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 PATZ1Q9HBE1 687 aaKnown RBP11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 PXMP4Q9Y6I8 212 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 IGHV3-43A0A0B4J1X8 118 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 OOEPA6NGQ2 149 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 M0R143 59 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 IGHV3-43DP0DP04 118 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 CD99P14209 185 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 CD82P27701 267 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 CD1BP29016 333 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 BRWD1-AS2P59051 145 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 OR1C1Q15619 314 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 VWC2Q2TAL6 325 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 LINC00696Q6ZRV3 163 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 TCF23Q7RTU1 214 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 TMEM251Q8N6I4 163 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 ZNF114Q8NC26 417 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 MAFAQ8NHW3 353 aaPredicted RBP11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 TAAR6Q96RI8 345 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 KCNIP2Q9NS61 270 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 LOXL2Q9Y4K0 774 aa11.69□□□□□ -0.54
VPS9D1-202ENST00000561976 CELA3BP08861 270 aa11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 KITLGP21583 273 aa11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 PCP4P48539 62 aa11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 CASP6P55212 293 aa11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 BCL2L2Q92843 193 aaPredicted RBP11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 SFRP2Q96HF1 295 aa11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 TMEM204Q9BSN7 226 aa11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 GP6Q9HCN6 339 aa11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 POLR3KQ9Y2Y1 108 aaPredicted RBP11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 DEFB108AA8MXU0 73 aa11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 WNT9BO14905 357 aa11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 TMPRSS2O15393 492 aa11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 NUPR1O60356 82 aa11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 HOXA4Q00056 320 aaPredicted RBP11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 MRPL49Q13405 166 aaKnown RBP11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 CYB5R2Q6BCY4 276 aa11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 TMEM144Q7Z5S9 345 aa11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 QTRT1Q9BXR0 403 aaKnown RBP11.68□□□□□ -0.54
VPS9D1-202ENST00000561976 MARCH11A6NNE9 402 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 C15orf62A8K5M9 175 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 TFF1P04155 84 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 OR10J1P30954 320 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 FOXL1Q12952 345 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 C1orf194Q5T5A4 169 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 ZNF826PQ6ZT77 177 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 RFESDQ8TAC1 157 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 ZDHHC11Q9H8X9 412 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 OBP2BQ9NPH6 170 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 ELOVL5Q9NYP7 299 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 WDR83OSQ9Y284 106 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 GRIFINA4D1Z8 144 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 LINC00473A8K010 186 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 RBFOX2O43251 390 aaKnown RBP eCLIP11.67□□□□□ -0.541e-6■■■□□ 16.8
VPS9D1-202ENST00000561976 SMPD2O60906 423 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 ADMP35318 185 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 SOX8P57073 446 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 EIF4EBP1Q13541 118 aaPredicted RBP11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 FBXW9Q5XUX1 488 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 TPRX1Q8N7U7 411 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 TBX15Q96SF7 602 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 ABI3Q9P2A4 366 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 PSG11Q9UQ72 335 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 GTF3C1Q12789 2109 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 CELSR3Q9NYQ7 3312 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 RPL29P47914 159 aaKnown RBP11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 LTC4SQ16873 150 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 PDLIM3Q53GG5 364 aaPredicted RBP11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 ZNF705AQ6ZN79 300 aaPredicted RBP11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 CMTM2Q8TAZ6 248 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 SLC25A40Q8TBP6 338 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 DIRC2Q96SL1 478 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 IMMP2LQ96T52 175 aa11.67□□□□□ -0.54
VPS9D1-202ENST00000561976 FRYQ5TBA9 3013 aa11.66□□□□□ -0.54
VPS9D1-202ENST00000561976 ARL14EPLP0DKL9 152 aa11.66□□□□□ -0.54
VPS9D1-202ENST00000561976 SSTR5P35346 364 aa11.66□□□□□ -0.54
VPS9D1-202ENST00000561976 SLC35E4Q6ICL7 350 aa11.66□□□□□ -0.54
VPS9D1-202ENST00000561976 TMPRSS7Q7RTY8 843 aa11.66□□□□□ -0.54
VPS9D1-202ENST00000561976 R3HDM4Q96D70 268 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms