RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 H1FOOQ8IZA3 346 aaPredicted RBP11.2□□□□□ -0.62
PKNOX1-209ENST00000560448 Q8N2B8 174 aa11.2□□□□□ -0.62
PKNOX1-209ENST00000560448 ZBTB8BQ8NAP8 495 aaPredicted RBP11.2□□□□□ -0.62
PKNOX1-209ENST00000560448 OR2T6Q8NHC8 308 aa11.2□□□□□ -0.62
PKNOX1-209ENST00000560448 SLC25A33Q9BSK2 321 aa11.2□□□□□ -0.62
PKNOX1-209ENST00000560448 ZNF436Q9C0F3 470 aaPredicted RBP11.2□□□□□ -0.62
PKNOX1-209ENST00000560448 PRSS22Q9GZN4 317 aa11.2□□□□□ -0.62
PKNOX1-209ENST00000560448 NECAP2Q9NVZ3 263 aa11.2□□□□□ -0.62
PKNOX1-209ENST00000560448 GPR132Q9UNW8 380 aa11.2□□□□□ -0.62
PKNOX1-209ENST00000560448 MOB4Q9Y3A3 225 aa11.2□□□□□ -0.62
PKNOX1-209ENST00000560448 ST8SIA5O15466 376 aa11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 OR2A4O95047 310 aa11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 MOSP00540 346 aa11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 SNRNP70P08621 437 aaKnown RBP11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 GPR12P47775 334 aa11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 OR3A3P47888 321 aa11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 RELBQ01201 579 aa11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 DIAPH2-AS1Q14236 149 aa11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 AADACL3Q5VUY0 350 aa11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 FAM53AQ6NSI3 398 aaPredicted RBP11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 Q6ZSV7 163 aa11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 MARCH1Q8TCQ1 289 aa11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 OR2A7Q96R45 310 aa11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 MGAT4CQ9UBM8 478 aa11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 RBM7Q9Y580 266 aaKnown RBP11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 COL6A5A8TX70 2615 aa11.19□□□□□ -0.62
PKNOX1-209ENST00000560448 G3V3Q6 166 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 CHST1O43916 411 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 IGKV1D-33P01593 117 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 IGKV1-33P01594 117 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 TMEM11P17152 192 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 REG1BP48304 166 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 DHODHQ02127 395 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 HES1Q14469 280 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 MSMO1Q15800 293 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 C2orf68Q2NKX9 166 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 C4orf46Q504U0 113 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 ZNF660Q6AZW8 331 aaPredicted RBP11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 TMED4Q7Z7H5 227 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 TMEM17Q86X19 198 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 LINC01006Q8NI28 216 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 RNF5Q99942 180 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 ZNF251Q9BRH9 671 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 EHFQ9NZC4 300 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 OR2W1Q9Y3N9 320 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 DNHD1Q96M86 4753 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 LUMP51884 338 aaPredicted RBP11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 TSPAN5P62079 268 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 IFITM2Q01629 132 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 DHRS2Q13268 280 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 C5orf24Q7Z6I8 188 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 LYG2Q86SG7 212 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 TMEM219Q86XT9 240 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 C12orf45Q8N5I9 185 aaPredicted RBP11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 Q8N6K4 173 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 C3orf56Q8N813 242 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 ADAD2Q8NCV1 583 aaKnown RBP11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 OR5AN1Q8NGI8 311 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 ADTRPQ96IZ2 230 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 EAF1Q96JC9 268 aaPredicted RBP11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 HYLS1Q96M11 299 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 NABP2Q9BQ15 211 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 ZNF747Q9BV97 191 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 C5orf66Q9H5L9 145 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 RNF114Q9Y508 228 aa11.18□□□□□ -0.62
PKNOX1-209ENST00000560448 TUSC2O75896 110 aa11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 GIPP09681 153 aaPredicted RBP11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 OR8U9P0C7N5 309 aa11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 TAS2R31P59538 309 aa11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 UBE2MP61081 183 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 PPP1R1AQ13522 171 aa11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 SURF2Q15527 256 aaPredicted RBP11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 LAMTOR1Q6IAA8 161 aa11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 SHISA2Q6UWI4 295 aa11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 DHRS11Q6UWP2 260 aa11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 PDPNQ86YL7 162 aa11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 OR8U1Q8NH10 309 aa11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 ZFAND1Q8TCF1 268 aa11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 TMEM230Q96A57 120 aa11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 ABHD14BQ96IU4 210 aa11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 SCGB3A2Q96PL1 93 aa11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 RTBDNQ9BSG5 229 aaPredicted RBP11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 MRPL20Q9BYC9 149 aaKnown RBP11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 OR2D2Q9H210 308 aa11.17□□□□□ -0.62
PKNOX1-209ENST00000560448 C9orf170A2RU37 121 aa11.16□□□□□ -0.62
PKNOX1-209ENST00000560448 APOA2P02652 100 aa11.16□□□□□ -0.62
PKNOX1-209ENST00000560448 OR5H8P0DN80 308 aa11.16□□□□□ -0.62
PKNOX1-209ENST00000560448 RRASP10301 218 aa11.16□□□□□ -0.62
PKNOX1-209ENST00000560448 HLA-GP17693 338 aa11.16□□□□□ -0.62
PKNOX1-209ENST00000560448 MDKP21741 143 aaPredicted RBP11.16□□□□□ -0.62
PKNOX1-209ENST00000560448 CD24P25063 80 aa11.16□□□□□ -0.62
PKNOX1-209ENST00000560448 ZNF645Q8N7E2 425 aa11.16□□□□□ -0.62
PKNOX1-209ENST00000560448 ZBTB34Q8NCN2 500 aa11.16□□□□□ -0.62
PKNOX1-209ENST00000560448 OR11H4Q8NGC9 324 aa11.16□□□□□ -0.62
PKNOX1-209ENST00000560448 WDR89Q96FK6 387 aaPredicted RBP11.16□□□□□ -0.62
PKNOX1-209ENST00000560448 PARP12Q9H0J9 701 aaKnown RBP11.16□□□□□ -0.62
PKNOX1-209ENST00000560448 PLSCR3Q9NRY6 295 aa11.16□□□□□ -0.62
PKNOX1-209ENST00000560448 LIN7CQ9NUP9 197 aaKnown RBP11.16□□□□□ -0.62
PKNOX1-209ENST00000560448 WASHC3Q9Y3C0 194 aa11.16□□□□□ -0.62
PKNOX1-209ENST00000560448 BOLA1Q9Y3E2 137 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms