RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 TMEM213A2RRL7 107 aa12.33□□□□□ -0.44
HERC1-207ENST00000560316 GGCTO75223 188 aaKnown RBP12.33□□□□□ -0.44
HERC1-207ENST00000560316 OR2J3O76001 311 aa12.33□□□□□ -0.44
HERC1-207ENST00000560316 IDO2Q6ZQW0 420 aa12.33□□□□□ -0.44
HERC1-207ENST00000560316 UXS1Q8NBZ7 420 aa12.33□□□□□ -0.44
HERC1-207ENST00000560316 SLC29A1Q99808 456 aa12.33□□□□□ -0.44
HERC1-207ENST00000560316 PLEKHJ1Q9NW61 149 aa12.33□□□□□ -0.44
HERC1-207ENST00000560316 AK3Q9UIJ7 227 aa12.33□□□□□ -0.44
HERC1-207ENST00000560316 TRBV6-6A0A0A6YYG2 114 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 IGKV1-6A0A0C4DH72 117 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 IGHV3-23P01764 117 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 DCKP27707 260 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 APOC4P55056 127 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 PRSS8Q16651 343 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 ANKRD55Q3KP44 614 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 TMEM177Q53S58 311 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 CBR4Q8N4T8 237 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 TMEM217Q8N7C4 229 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 NKAIN3Q8N8D7 197 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 NECAP1Q8NC96 275 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 PYDC1Q8WXC3 89 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 ACOT12Q8WYK0 555 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 TMEM59Q9BXS4 323 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 RDH8Q9NYR8 311 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 EXOSC1Q9Y3B2 195 aaKnown RBP12.32□□□□□ -0.44
HERC1-207ENST00000560316 ABCA13Q86UQ4 5058 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 PKHD1P08F94 4074 aa12.32□□□□□ -0.44
HERC1-207ENST00000560316 A0A0A6YYD4 124 aa12.31□□□□□ -0.44
HERC1-207ENST00000560316 ZNF320A2RRD8 509 aa12.31□□□□□ -0.44
HERC1-207ENST00000560316 UNC119Q13432 240 aa12.31□□□□□ -0.44
HERC1-207ENST00000560316 BTNL8Q6UX41 500 aa12.31□□□□□ -0.44
HERC1-207ENST00000560316 C19orf35Q6ZS72 473 aa12.31□□□□□ -0.44
HERC1-207ENST00000560316 GPHB5Q86YW7 130 aa12.31□□□□□ -0.44
HERC1-207ENST00000560316 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.31□□□□□ -0.44
HERC1-207ENST00000560316 RNF183Q96D59 192 aa12.31□□□□□ -0.44
HERC1-207ENST00000560316 C5orf30Q96GV9 206 aa12.31□□□□□ -0.44
HERC1-207ENST00000560316 RIMS4Q9H426 269 aaPredicted RBP12.31□□□□□ -0.44
HERC1-207ENST00000560316 SDHAF2Q9NX18 166 aa12.31□□□□□ -0.44
HERC1-207ENST00000560316 UBQLN2Q9UHD9 624 aa12.31□□□□□ -0.44
HERC1-207ENST00000560316 S4R3C0 116 aa12.31□□□□□ -0.44
HERC1-207ENST00000560316 WBP4O75554 376 aaKnown RBP12.3□□□□□ -0.44
HERC1-207ENST00000560316 UBBP0CG47 229 aa12.3□□□□□ -0.44
HERC1-207ENST00000560316 MYL12AP19105 171 aa12.3□□□□□ -0.44
HERC1-207ENST00000560316 ARL3P36405 182 aa12.3□□□□□ -0.44
HERC1-207ENST00000560316 CBX3Q13185 183 aa12.3□□□□□ -0.44
HERC1-207ENST00000560316 VMA21Q3ZAQ7 101 aa12.3□□□□□ -0.44
HERC1-207ENST00000560316 C10orf55Q5SWW7 151 aa12.3□□□□□ -0.44
HERC1-207ENST00000560316 TTC9CQ8N5M4 171 aa12.3□□□□□ -0.44
HERC1-207ENST00000560316 TEX45Q8NA69 505 aa12.3□□□□□ -0.44
HERC1-207ENST00000560316 OR1L6Q8NGR2 347 aa12.3□□□□□ -0.44
HERC1-207ENST00000560316 GGHQ92820 318 aa12.3□□□□□ -0.44
HERC1-207ENST00000560316 TM2D1Q9BX74 207 aa12.3□□□□□ -0.44
HERC1-207ENST00000560316 OR2D2Q9H210 308 aa12.3□□□□□ -0.44
HERC1-207ENST00000560316 Q9N2K0 584 aa12.3□□□□□ -0.44
HERC1-207ENST00000560316 LOC100130705A0A1B0GUX0 176 aa12.29□□□□□ -0.44
HERC1-207ENST00000560316 UBE2CO00762 179 aa12.29□□□□□ -0.44
HERC1-207ENST00000560316 CD3GP09693 182 aa12.29□□□□□ -0.44
HERC1-207ENST00000560316 NANOS2P60321 138 aaKnown RBP12.29□□□□□ -0.44
HERC1-207ENST00000560316 UBE2KP61086 200 aa12.29□□□□□ -0.44
HERC1-207ENST00000560316 TAGLNQ01995 201 aaKnown RBP12.29□□□□□ -0.44
HERC1-207ENST00000560316 RTL8BQ17RB0 113 aa12.29□□□□□ -0.44
HERC1-207ENST00000560316 CLEC19AQ6UXS0 136 aa12.29□□□□□ -0.44
HERC1-207ENST00000560316 ZNF485Q8NCK3 441 aa12.29□□□□□ -0.44
HERC1-207ENST00000560316 FBLIM1Q8WUP2 373 aa12.29□□□□□ -0.44
HERC1-207ENST00000560316 CCDC140Q96MF4 163 aa12.29□□□□□ -0.44
HERC1-207ENST00000560316 ZNF430Q9H8G1 570 aaPredicted RBP12.29□□□□□ -0.44
HERC1-207ENST00000560316 MGAT4AQ9UM21 535 aa12.29□□□□□ -0.44
HERC1-207ENST00000560316 DIMT1Q9UNQ2 313 aaKnown RBP12.29□□□□□ -0.44
HERC1-207ENST00000560316 FAT2Q9NYQ8 4349 aa12.28□□□□□ -0.44
HERC1-207ENST00000560316 MUC4Q99102 2169 aa12.28□□□□□ -0.44
HERC1-207ENST00000560316 A8MWP6 167 aa12.28□□□□□ -0.44
HERC1-207ENST00000560316 SOCS1O15524 211 aa12.28□□□□□ -0.44
HERC1-207ENST00000560316 MED14OSP0DP75 135 aa12.28□□□□□ -0.44
HERC1-207ENST00000560316 CTRB1P17538 263 aa12.28□□□□□ -0.44
HERC1-207ENST00000560316 RPL35AP18077 110 aaKnown RBP12.28□□□□□ -0.44
HERC1-207ENST00000560316 FAM106AQ4KMX7 169 aa12.28□□□□□ -0.44
HERC1-207ENST00000560316 FAM209BQ5JX69 171 aa12.28□□□□□ -0.44
HERC1-207ENST00000560316 CTRB2Q6GPI1 263 aa12.28□□□□□ -0.44
HERC1-207ENST00000560316 RBPMS2Q6ZRY4 209 aaKnown RBP12.28□□□□□ -0.44
HERC1-207ENST00000560316 STPG3Q8N7X2 389 aa12.28□□□□□ -0.44
HERC1-207ENST00000560316 FBXL17Q9UF56 701 aa12.28□□□□□ -0.44
HERC1-207ENST00000560316 FBXL7Q9UJT9 491 aa12.28□□□□□ -0.44
HERC1-207ENST00000560316 HMX3A6NHT5 357 aa12.27□□□□□ -0.45
HERC1-207ENST00000560316 CRYZL1O95825 349 aa12.27□□□□□ -0.45
HERC1-207ENST00000560316 SRMP19623 302 aa12.27□□□□□ -0.45
HERC1-207ENST00000560316 CEACAM19Q7Z692 300 aa12.27□□□□□ -0.45
HERC1-207ENST00000560316 OR2C3Q8N628 320 aa12.27□□□□□ -0.45
HERC1-207ENST00000560316 SPIN2AQ99865 258 aa12.27□□□□□ -0.45
HERC1-207ENST00000560316 SPIN2BQ9BPZ2 258 aa12.27□□□□□ -0.45
HERC1-207ENST00000560316 DNAH2Q9P225 4427 aa12.27□□□□□ -0.45
HERC1-207ENST00000560316 TRAV25A0A0B4J276 109 aa12.26□□□□□ -0.45
HERC1-207ENST00000560316 TMEM14DPA8MWL7 114 aa12.26□□□□□ -0.45
HERC1-207ENST00000560316 TRDCB7Z8K6 153 aa12.26□□□□□ -0.45
HERC1-207ENST00000560316 ACTL6BO94805 426 aa12.26□□□□□ -0.45
HERC1-207ENST00000560316 RRASP10301 218 aa12.26□□□□□ -0.45
HERC1-207ENST00000560316 FCGR2BP31994 310 aaPredicted RBP12.26□□□□□ -0.45
HERC1-207ENST00000560316 MAP2K4P45985 399 aa12.26□□□□□ -0.45
HERC1-207ENST00000560316 QRFPP83859 136 aa12.26□□□□□ -0.45
HERC1-207ENST00000560316 INSL4Q14641 139 aa12.26□□□□□ -0.45
HERC1-207ENST00000560316 ZNF585BQ52M93 769 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms