RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 CD24P25063 80 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 IL3RAP26951 378 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 CD1BP29016 333 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 CEACAM3P40198 252 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 THBS3P49746 956 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 DYNLT3P51808 116 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 UBE2MP61081 183 aaKnown RBP7.51□□□□□ -1.21
HERC1-206ENST00000559996 DHRS2Q13268 280 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 Q6YL49 198 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 THNSL2Q86YJ6 484 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 CMTM1Q8IZ96 169 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 MINDY2Q8NBR6 621 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 OR51H1Q8NH63 302 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 TMEM56Q96MV1 263 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 TMEM222Q9H0R3 208 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 PLSCR3Q9NRY6 295 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 TMEM56-RWDD3S4R434 201 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 F8P00451 2351 aa7.51□□□□□ -1.21
HERC1-206ENST00000559996 A0A0A6YYJ9 748 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 A0A0G2JRQ6 117 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 A0A1B0GVG6 124 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 DBX1A6NMT0 343 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 INAFM1C9JVW0 142 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 H0Y980 276 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 RBFOX2O43251 390 aaKnown RBP eCLIP7.5□□□□□ -1.21
HERC1-206ENST00000559996 TXNL1O43396 289 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 FCGR3BO75015 233 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 VENTXO95231 258 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 CRYGBP07316 175 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 P0C879 139 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 CNTFRP26992 372 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 LPAR6P43657 344 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 IER3P46695 156 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 F2RL1P55085 397 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 SLC9A3R2Q15599 337 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 C2orf68Q2NKX9 166 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 TRIM16LQ309B1 348 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 ABCA11PQ4W5N1 156 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 TMEM177Q53S58 311 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 LYG2Q86SG7 212 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 MOB3BQ86TA1 216 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 SELENOHQ8IZQ5 122 aaKnown RBP7.5□□□□□ -1.21
HERC1-206ENST00000559996 SPAG16Q8N0X2 631 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 LRTM2Q8N967 370 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 CCDC71LQ8N9Z2 235 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 TCTEX1D2Q8WW35 142 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 SEC22AQ96IW7 307 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 ADTRPQ96IZ2 230 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 EAF1Q96JC9 268 aaPredicted RBP7.5□□□□□ -1.21
HERC1-206ENST00000559996 MS4A7Q9GZW8 240 aaPredicted RBP7.5□□□□□ -1.21
HERC1-206ENST00000559996 SLC35D1Q9NTN3 355 aa7.5□□□□□ -1.21
HERC1-206ENST00000559996 FN1P02751 2386 aaKnown RBP7.5□□□□□ -1.21
HERC1-206ENST00000559996 S1PR2O95136 353 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 DUS4LO95620 317 aaKnown RBP7.49□□□□□ -1.21
HERC1-206ENST00000559996 HPRT1P00492 218 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 IGKV1-5P01602 117 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 SNRNP70P08621 437 aaKnown RBP7.49□□□□□ -1.21
HERC1-206ENST00000559996 MC5RP33032 325 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 TAS2R31P59538 309 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 AANATQ16613 207 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 POU2AF1Q16633 256 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 TATDN3Q17R31 274 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 OR2B11Q5JQS5 317 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 Q6ZRM9 215 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 PDPNQ86YL7 162 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 SGPP2Q8IWX5 399 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 TCTEX1D1Q8N7M0 179 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 ZNF431Q8TF32 576 aaPredicted RBP7.49□□□□□ -1.21
HERC1-206ENST00000559996 MITD1Q8WV92 249 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 SSX3Q99909 188 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 ALG5Q9Y673 324 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 NAV3Q8IVL0 2385 aa7.49□□□□□ -1.21
HERC1-206ENST00000559996 HIVEP2P31629 2446 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 A0A0B4J2A0 478 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 A6NDX4 124 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 SNRPGP15A8MWD9 76 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 PRAF2O60831 178 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 B3GALNT1O75752 331 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 NDUFA3O95167 84 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 CRYZL1O95825 349 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 DHFRP00374 187 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 IFNA2P01563 188 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 IGKV1D-33P01593 117 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 IGKV1-33P01594 117 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 HLA-AP01891 365 aaKnown RBP7.48□□□□□ -1.21
HERC1-206ENST00000559996 AMY1AP04745 511 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 FBP1P09467 338 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 TAGLNQ01995 201 aaKnown RBP7.48□□□□□ -1.21
HERC1-206ENST00000559996 CATR1Q13166 79 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 LIN54Q6MZP7 749 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 CCDC144NLQ6NUI1 221 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 LYZL2Q7Z4W2 148 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 VKORC1L1Q8N0U8 176 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 PUSL1Q8N0Z8 303 aaKnown RBP7.48□□□□□ -1.21
HERC1-206ENST00000559996 CADM3Q8N126 398 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 NPBQ8NG41 125 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 WDR89Q96FK6 387 aaPredicted RBP7.48□□□□□ -1.21
HERC1-206ENST00000559996 RNF5Q99942 180 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 PLEKHA2Q9HB19 425 aa7.48□□□□□ -1.21
HERC1-206ENST00000559996 ESM1Q9NQ30 184 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms