RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 ZNF75CPQ92670 426 aaPredicted RBP0.55□□□□□ -2.32
CASC4-210ENST00000559550 PPCDCQ96CD2 204 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 PARVAQ9NVD7 372 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 POLEQ07864 2286 aa0.55□□□□□ -2.32
CASC4-210ENST00000559550 PTPRBP23467 1997 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 TRAV8-1A0A0A6YYK1 113 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 SERPINA7P05543 415 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 PRB4P10163 310 aaPredicted RBP0.54□□□□□ -2.32
CASC4-210ENST00000559550 CXCL2P19875 107 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 CFL1P23528 166 aaKnown RBP0.54□□□□□ -2.32
CASC4-210ENST00000559550 TMEM33P57088 247 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 BTN3A2P78410 334 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 ZNHIT3Q15649 155 aaPredicted RBP0.54□□□□□ -2.32
CASC4-210ENST00000559550 LYZL1Q6UWQ5 148 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 C7orf65Q6ZTY9 151 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 SLC36A1Q7Z2H8 476 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 OR52E4Q8NGH9 312 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 IMMP2LQ96T52 175 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 DOHHQ9BU89 302 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 ADAT1Q9BUB4 502 aaKnown RBP0.54□□□□□ -2.32
CASC4-210ENST00000559550 MROQ9BYG7 248 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 TMEM222Q9H0R3 208 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 METTL9Q9H1A3 318 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 CST9LQ9H4G1 147 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 HDGFL3Q9Y3E1 203 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 MYH11P35749 1972 aa0.54□□□□□ -2.32
CASC4-210ENST00000559550 THSD7AQ9UPZ6 1657 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 IGHV1-18A0A0C4DH31 117 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 DAPL1A0PJW8 107 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 OR6C6A6NF89 314 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 HMSDA8MTL9 139 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 MKRN2OSH3BPM6 223 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 SMLR1H3BR10 107 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 AZIN1O14977 448 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 CXCL3P19876 107 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 CA5AP35218 305 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 TBPL1P62380 186 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 GNA13Q14344 377 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 SURF2Q15527 256 aaPredicted RBP0.53□□□□□ -2.32
CASC4-210ENST00000559550 USF2Q15853 346 aaPredicted RBP0.53□□□□□ -2.32
CASC4-210ENST00000559550 MIAQ16674 131 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 Q1T7F1 81 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 CLEC12BQ2HXU8 276 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 LRRC26Q2I0M4 334 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 FAM45BPQ6NSW5 357 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 ZNF705AQ6ZN79 300 aaPredicted RBP0.53□□□□□ -2.32
CASC4-210ENST00000559550 GPHB5Q86YW7 130 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 BOD1L2Q8IYS8 172 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 Q8N2B8 174 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 C17orf78Q8N4C9 275 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 ATP6V1C2Q8NEY4 427 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 OR13C8Q8NGS7 320 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 OR5AK3PQ8NH89 298 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 SLC7A6Q92536 515 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 MS4A6EQ96DS6 147 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 PCYT1BQ9Y5K3 369 aaPredicted RBP0.53□□□□□ -2.32
CASC4-210ENST00000559550 ABCC12Q96J65 1359 aa0.53□□□□□ -2.32
CASC4-210ENST00000559550 CACNA1BQ00975 2339 aa0.53□□□□□ -2.33
CASC4-210ENST00000559550 MUC5BQ9HC84 5762 aaPredicted RBP0.52□□□□□ -2.33
CASC4-210ENST00000559550 MYOFQ9NZM1 2061 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 MEIKINA0A087WXM9 373 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 TMED7-TICAM2A0A0A6YYA0 188 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 A0A0D9SEW6 157 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 F8W036 122 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 MT-CO2P00403 227 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 RPSAP08865 295 aaKnown RBP0.52□□□□□ -2.33
CASC4-210ENST00000559550 LGALS1P09382 135 aaKnown RBP0.52□□□□□ -2.33
CASC4-210ENST00000559550 TPM1P09493 284 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 LINC00614P0C842 121 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 F8A1P23610 371 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 MIPP30301 263 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 TPI1P60174 286 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 FABP5Q01469 135 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 EMX1Q04741 257 aaPredicted RBP0.52□□□□□ -2.33
CASC4-210ENST00000559550 SAPCD1Q5SSQ6 148 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 C9orf163Q8N9P6 203 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 OR10D3Q8NH80 312 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 C19orf60Q96EN9 201 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 C1orf109Q9NX04 203 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 PCDH15Q96QU1 1955 aa0.52□□□□□ -2.33
CASC4-210ENST00000559550 TRAV7A0A075B6U4 112 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 ZNF879B4DU55 563 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 C9JCJ5 164 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 H3BT86 120 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 HLA-DQB2P05538 268 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 RPL28P46779 137 aaKnown RBP0.51□□□□□ -2.33
CASC4-210ENST00000559550 ETV1P50549 477 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 SLAMF1Q13291 335 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 HLA-DRB5Q30154 266 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 ARHGAP11BQ3KRB8 267 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 ARFGEF3Q5TH69 2177 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 FAM173BQ6P4H8 233 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 C12orf43Q96C57 262 aaKnown RBP0.51□□□□□ -2.33
CASC4-210ENST00000559550 TMA16Q96EY4 203 aaKnown RBP0.51□□□□□ -2.33
CASC4-210ENST00000559550 ZNF514Q96K75 400 aaPredicted RBP0.51□□□□□ -2.33
CASC4-210ENST00000559550 ODF3Q96PU9 254 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 RBP7Q96R05 134 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 MED10Q9BTT4 135 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 TMEM109Q9BVC6 243 aa0.51□□□□□ -2.33
CASC4-210ENST00000559550 NSRP1Q9H0G5 558 aaKnown RBP0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms