RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 OR13C8Q8NGS7 320 aa17.24■□□□□ 0.35
SNX1-206ENST00000559389 FLYWCH2Q96CP2 140 aaKnown RBP17.24■□□□□ 0.35
SNX1-206ENST00000559389 C16orf95Q9H693 158 aa17.24■□□□□ 0.35
SNX1-206ENST00000559389 MCUBQ9NWR8 336 aa17.24■□□□□ 0.35
SNX1-206ENST00000559389 NCBP2LA6PVI3 153 aaKnown RBP17.23■□□□□ 0.35
SNX1-206ENST00000559389 RLN1P04808 185 aa17.23■□□□□ 0.35
SNX1-206ENST00000559389 CD40LGP29965 261 aa17.23■□□□□ 0.35
SNX1-206ENST00000559389 ECI1P42126 302 aa17.23■□□□□ 0.35
SNX1-206ENST00000559389 INPP1P49441 399 aa17.23■□□□□ 0.35
SNX1-206ENST00000559389 ABCA11PQ4W5N1 156 aa17.23■□□□□ 0.35
SNX1-206ENST00000559389 PHLDA2Q53GA4 152 aa17.23■□□□□ 0.35
SNX1-206ENST00000559389 TMEM177Q53S58 311 aa17.23■□□□□ 0.35
SNX1-206ENST00000559389 OR51H1Q8NH63 302 aa17.23■□□□□ 0.35
SNX1-206ENST00000559389 ZNF486Q96H40 463 aaPredicted RBP17.23■□□□□ 0.35
SNX1-206ENST00000559389 HARBI1Q96MB7 349 aa17.23■□□□□ 0.35
SNX1-206ENST00000559389 PRSS22Q9GZN4 317 aa17.23■□□□□ 0.35
SNX1-206ENST00000559389 LIN7CQ9NUP9 197 aaKnown RBP17.23■□□□□ 0.35
SNX1-206ENST00000559389 SCP2D1Q9UJQ7 156 aa17.23■□□□□ 0.35
SNX1-206ENST00000559389 SH2D7A6NKC9 451 aaPredicted RBP17.22■□□□□ 0.35
SNX1-206ENST00000559389 FCGR3BO75015 233 aa17.22■□□□□ 0.35
SNX1-206ENST00000559389 PGLYRP1O75594 196 aaPredicted RBP17.22■□□□□ 0.35
SNX1-206ENST00000559389 SPDEFO95238 335 aa17.22■□□□□ 0.35
SNX1-206ENST00000559389 CRYZL1O95825 349 aa17.22■□□□□ 0.35
SNX1-206ENST00000559389 KIR2DS2P43631 304 aa17.22■□□□□ 0.35
SNX1-206ENST00000559389 BRWD1-AS2P59051 145 aa17.22■□□□□ 0.35
SNX1-206ENST00000559389 FOXL1Q12952 345 aa17.22■□□□□ 0.35
SNX1-206ENST00000559389 ZNF846Q147U1 533 aa17.22■□□□□ 0.35
SNX1-206ENST00000559389 SURF2Q15527 256 aaPredicted RBP17.22■□□□□ 0.35
SNX1-206ENST00000559389 IDO2Q6ZQW0 420 aa17.22■□□□□ 0.35
SNX1-206ENST00000559389 Q6ZS46 218 aa17.22■□□□□ 0.35
SNX1-206ENST00000559389 OR4S2Q8NH73 311 aa17.22■□□□□ 0.35
SNX1-206ENST00000559389 MARCH1Q8TCQ1 289 aa17.22■□□□□ 0.35
SNX1-206ENST00000559389 TSNAXQ99598 290 aaKnown RBP17.22■□□□□ 0.35
SNX1-206ENST00000559389 MDFIQ99750 246 aa17.22■□□□□ 0.35
SNX1-206ENST00000559389 SLC2A9Q9NRM0 540 aa17.22■□□□□ 0.35
SNX1-206ENST00000559389 PEX14O75381 377 aa17.21■□□□□ 0.35
SNX1-206ENST00000559389 MDKP21741 143 aaPredicted RBP17.21■□□□□ 0.35
SNX1-206ENST00000559389 RND3P61587 244 aa17.21■□□□□ 0.35
SNX1-206ENST00000559389 RPS16P62249 146 aaKnown RBP17.21■□□□□ 0.35
SNX1-206ENST00000559389 OR2T6Q8NHC8 308 aa17.21■□□□□ 0.35
SNX1-206ENST00000559389 LINC01006Q8NI28 216 aa17.21■□□□□ 0.35
SNX1-206ENST00000559389 OSR1Q8TAX0 266 aaPredicted RBP17.21■□□□□ 0.35
SNX1-206ENST00000559389 KIAA1456Q9P272 454 aa17.21■□□□□ 0.35
SNX1-206ENST00000559389 MMP24Q9Y5R2 645 aa17.21■□□□□ 0.35
SNX1-206ENST00000559389 RRHO14718 337 aa17.2■□□□□ 0.34
SNX1-206ENST00000559389 RBFOX2O43251 390 aaKnown RBP eCLIP17.2■□□□□ 0.34
SNX1-206ENST00000559389 IGLV2-23P01705 113 aa17.2■□□□□ 0.34
SNX1-206ENST00000559389 CTSDP07339 412 aaPredicted RBP17.2■□□□□ 0.34
SNX1-206ENST00000559389 PI3P19957 117 aa17.2■□□□□ 0.34
SNX1-206ENST00000559389 S100GP29377 79 aa17.2■□□□□ 0.34
SNX1-206ENST00000559389 LGALS7P47929 136 aa17.2■□□□□ 0.34
SNX1-206ENST00000559389 COMPP49747 757 aaPredicted RBP17.2■□□□□ 0.34
SNX1-206ENST00000559389 C5orf64Q2M2E5 130 aa17.2■□□□□ 0.34
SNX1-206ENST00000559389 AWAT1Q58HT5 328 aa17.2■□□□□ 0.34
SNX1-206ENST00000559389 ZFAND1Q8TCF1 268 aa17.2■□□□□ 0.34
SNX1-206ENST00000559389 RASL11BQ9BPW5 248 aa17.2■□□□□ 0.34
SNX1-206ENST00000559389 SIGLEC9Q9Y336 463 aa17.2■□□□□ 0.34
SNX1-206ENST00000559389 A0A1B0GUS0 222 aa17.19■□□□□ 0.34
SNX1-206ENST00000559389 CLPSL1A2RUU4 121 aa17.19■□□□□ 0.34
SNX1-206ENST00000559389 SHOXO15266 292 aa17.19■□□□□ 0.34
SNX1-206ENST00000559389 RAMP3O60896 148 aa17.19■□□□□ 0.34
SNX1-206ENST00000559389 PSG5Q15238 335 aa17.19■□□□□ 0.34
SNX1-206ENST00000559389 TBC1D26Q86UD7 250 aa17.19■□□□□ 0.34
SNX1-206ENST00000559389 SPAG16Q8N0X2 631 aa17.19■□□□□ 0.34
SNX1-206ENST00000559389 BEX1Q9HBH7 125 aa17.19■□□□□ 0.34
SNX1-206ENST00000559389 NAP1L6A6NFF2 107 aa17.18■□□□□ 0.34
SNX1-206ENST00000559389 F2RP25116 425 aa17.18■□□□□ 0.34
SNX1-206ENST00000559389 PIGPP57054 158 aa17.18■□□□□ 0.34
SNX1-206ENST00000559389 TMEM95Q3KNT9 176 aa17.18■□□□□ 0.34
SNX1-206ENST00000559389 POC5Q8NA72 575 aa17.18■□□□□ 0.34
SNX1-206ENST00000559389 C7orf50Q9BRJ6 194 aaKnown RBP17.18■□□□□ 0.34
SNX1-206ENST00000559389 FBXL15Q9H469 300 aa17.18■□□□□ 0.34
SNX1-206ENST00000559389 SERTAD4Q9NUC0 356 aa17.18■□□□□ 0.34
SNX1-206ENST00000559389 METTL1Q9UBP6 276 aaKnown RBP17.18■□□□□ 0.34
SNX1-206ENST00000559389 GPR132Q9UNW8 380 aa17.18■□□□□ 0.34
SNX1-206ENST00000559389 ATRQ13535 2644 aa17.18■□□□□ 0.34
SNX1-206ENST00000559389 SRRM4A7MD48 611 aaKnown RBP17.17■□□□□ 0.34
SNX1-206ENST00000559389 SLC25A17O43808 307 aa17.17■□□□□ 0.34
SNX1-206ENST00000559389 HLA-DRB1P01911 266 aa17.17■□□□□ 0.34
SNX1-206ENST00000559389 VSIG10L2P0DP72 767 aa17.17■□□□□ 0.34
SNX1-206ENST00000559389 C9orf152Q5JTZ5 239 aa17.17■□□□□ 0.34
SNX1-206ENST00000559389 TCTEX1D1Q8N7M0 179 aa17.17■□□□□ 0.34
SNX1-206ENST00000559389 CCDC71LQ8N9Z2 235 aa17.17■□□□□ 0.34
SNX1-206ENST00000559389 CD300LFQ8TDQ1 290 aa17.17■□□□□ 0.34
SNX1-206ENST00000559389 HSPB9Q9BQS6 159 aa17.17■□□□□ 0.34
SNX1-206ENST00000559389 C5orf66Q9H5L9 145 aa17.17■□□□□ 0.34
SNX1-206ENST00000559389 TPSG1Q9NRR2 321 aa17.17■□□□□ 0.34
SNX1-206ENST00000559389 C14orf166Q9Y224 244 aaKnown RBP17.17■□□□□ 0.34
SNX1-206ENST00000559389 VSIG4Q9Y279 399 aa17.17■□□□□ 0.34
SNX1-206ENST00000559389 LINC00854A0A1B0GVQ3 168 aa17.16■□□□□ 0.34
SNX1-206ENST00000559389 MPPED1O15442 326 aa17.16■□□□□ 0.34
SNX1-206ENST00000559389 IGHG2P01859 326 aa17.16■□□□□ 0.34
SNX1-206ENST00000559389 CRYGBP07316 175 aa17.16■□□□□ 0.34
SNX1-206ENST00000559389 PROK1P58294 105 aa17.16■□□□□ 0.34
SNX1-206ENST00000559389 UBE2KP61086 200 aa17.16■□□□□ 0.34
SNX1-206ENST00000559389 ARSJQ5FYB0 599 aaPredicted RBP17.16■□□□□ 0.34
SNX1-206ENST00000559389 RTBDNQ9BSG5 229 aaPredicted RBP17.16■□□□□ 0.34
SNX1-206ENST00000559389 FAM212BQ9NTI7 297 aaPredicted RBP17.16■□□□□ 0.34
SNX1-206ENST00000559389 COPZ2Q9P299 210 aa17.16■□□□□ 0.34
SNX1-206ENST00000559389 RNF114Q9Y508 228 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms