RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 KHDC1LQ5JSQ8 128 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 ZNF497Q6ZNH5 498 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 MOB3BQ86TA1 216 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 LINC00596Q86U02 117 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 THNSL2Q86YJ6 484 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 OR4K15Q8NH41 348 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 GIMAP1Q8WWP7 306 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 PRRT1Q99946 306 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 SLC25A21Q9BQT8 299 aaPredicted RBP5.98□□□□□ -1.45
SPG11-205ENST00000558080 GINS4Q9BRT9 223 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 GPN1Q9HCN4 374 aaPredicted RBP5.98□□□□□ -1.45
SPG11-205ENST00000558080 AP5S1Q9NUS5 200 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 PLEKHJ1Q9NW61 149 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 SLC2A8Q9NY64 477 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 ELF5Q9UKW6 265 aaPredicted RBP5.98□□□□□ -1.45
SPG11-205ENST00000558080 TRAPPC2LQ9UL33 140 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 KCNK7Q9Y2U2 307 aa5.98□□□□□ -1.45
SPG11-205ENST00000558080 IGHV1-3A0A0C4DH29 117 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 PSMB11A5LHX3 300 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 C12orf77C9JDV5 145 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 M0QZK8 103 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 HSD17B6O14756 317 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 ARPC1BO15143 372 aaKnown RBP5.97□□□□□ -1.45
SPG11-205ENST00000558080 SLC31A2O15432 143 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 PDCD6O75340 191 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 GAPDHP04406 335 aaKnown RBP5.97□□□□□ -1.45
SPG11-205ENST00000558080 IFNA6P05013 189 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 PF4V1P10720 104 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 IGLL1P15814 213 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 DTYMKP23919 212 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 CHATP28329 748 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 EIF2B2P49770 351 aaKnown RBP5.97□□□□□ -1.45
SPG11-205ENST00000558080 LOXL3P58215 753 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 TAS2R46P59540 309 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 VAX1Q5SQQ9 334 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 KPRPQ5T749 579 aaPredicted RBP5.97□□□□□ -1.45
SPG11-205ENST00000558080 FAAP20Q6NZ36 180 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 C5orf24Q7Z6I8 188 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 ZNF329Q86UD4 541 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 HOGA1Q86XE5 327 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 OR8H3Q8N146 312 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 PRR18Q8N4B5 295 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 C5orf56Q8N8D9 126 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 OR4X2Q8NGF9 303 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 OR4D10Q8NGI6 311 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 OR10V1Q8NGI7 309 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 OR51S1Q8NGJ8 323 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 OR52M1Q8NGK5 317 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 OR6F1Q8NGZ6 308 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 OR1L1Q8NH94 360 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 RBMXL1Q96E39 390 aaKnown RBP5.97□□□□□ -1.45
SPG11-205ENST00000558080 NOL4LQ96MY1 436 aaPredicted RBP5.97□□□□□ -1.45
SPG11-205ENST00000558080 TINAGL1Q9GZM7 467 aaPredicted RBP5.97□□□□□ -1.45
SPG11-205ENST00000558080 MED28Q9H204 178 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 OR51J1Q9H342 316 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 GHITMQ9H3K2 345 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 SPACA1Q9HBV2 294 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 GFOD1Q9NXC2 390 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 LINC00527Q9UJ94 153 aa5.97□□□□□ -1.45
SPG11-205ENST00000558080 TSSC4Q9Y5U2 329 aaPredicted RBP5.97□□□□□ -1.45
SPG11-205ENST00000558080 LINC01548A6NM66 108 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 NCBP2LA6PVI3 153 aaKnown RBP5.96□□□□□ -1.46
SPG11-205ENST00000558080 SNRPGP15A8MWD9 76 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 M0QYG6 137 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 SPINT2O43291 252 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 SSNA1O43805 119 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 HBZP02008 142 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 PLA2G1BP04054 148 aaKnown RBP5.96□□□□□ -1.46
SPG11-205ENST00000558080 FCER2P06734 321 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 ZNF735P0CB33 412 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 RCC1P18754 421 aaPredicted RBP5.96□□□□□ -1.46
SPG11-205ENST00000558080 FUT3P21217 361 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 HRH1P35367 487 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 ZNF134P52741 427 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 CD300CQ08708 224 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 ZNF816Q0VGE8 651 aaPredicted RBP5.96□□□□□ -1.46
SPG11-205ENST00000558080 CBX3Q13185 183 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 CT45A1Q5HYN5 189 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 C6orf183Q5T699 404 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 SIGIRRQ6IA17 410 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 GLDNQ6ZMI3 551 aaPredicted RBP5.96□□□□□ -1.46
SPG11-205ENST00000558080 IDO2Q6ZQW0 420 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 C6orf201Q7Z4U5 140 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 TMEM17Q86X19 198 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 TCTE3Q8IZS6 198 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 ARRDC1Q8N5I2 433 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 LINC00311Q8N616 119 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 GVQW1Q8N7I0 195 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 DRAXINQ8NBI3 349 aaPredicted RBP5.96□□□□□ -1.46
SPG11-205ENST00000558080 OR5H2Q8NGV7 314 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 CT45A3Q8NHU0 189 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 ST6GAL2Q96JF0 529 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 CMSS1Q9BQ75 279 aaKnown RBP5.96□□□□□ -1.46
SPG11-205ENST00000558080 ALX4Q9H161 411 aaPredicted RBP5.96□□□□□ -1.46
SPG11-205ENST00000558080 RCC2Q9P258 522 aaKnown RBP5.96□□□□□ -1.46
SPG11-205ENST00000558080 GNG12Q9UBI6 72 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 FLVCR2Q9UPI3 526 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 TNCP24821 2201 aa5.96□□□□□ -1.46
SPG11-205ENST00000558080 FGF16O43320 207 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 CREBL2O60519 120 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms