RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 TRIM64CA6NLI5 447 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 LINC00473A8K010 186 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 ARPC1BO15143 372 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 CA2P00918 260 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 HLA-DQB1P01920 261 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 CTXN2P0C2S0 81 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 NFYAP23511 347 aaPredicted RBP6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 DUTP33316 252 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 CHRNA7P36544 502 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 LGALS7P47929 136 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 RAB25P57735 213 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 GNG2P59768 71 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 GNB1P62873 340 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 TAGLNQ01995 201 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 TMEM267Q0VDI3 215 aaPredicted RBP6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 FXYD3Q14802 87 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 MRGPRG-AS1Q2M3A8 158 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 TMEM177Q53S58 311 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 TCTEX1D1Q8N7M0 179 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 BVESQ8NE79 360 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 LFNGQ8NES3 379 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 OR11H1Q8NG94 326 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 OR5M8Q8NGP6 311 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 ABHD5Q8WTS1 349 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 CASTOR1Q8WTX7 329 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 ADTRPQ96IZ2 230 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 OR5B12Q96R08 314 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 KRTAP4-12Q9BQ66 201 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 SPATA2Q9UM82 520 aa6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 RBM7Q9Y580 266 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-206ENST00000558059 A0A0A6YYH2 397 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 IGKV1D-13A0A0B4J2D9 117 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 A6NJ64 397 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 J3QRK9 145 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 SHOXO15266 292 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 AIREO43918 545 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 TMEM127O75204 238 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 TUSC2O75896 110 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 TNFAIP8O95379 198 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 IGLV2-14P01704 120 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 IGKV1-13P0DP09 117 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 RRASP10301 218 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 RPS19P39019 145 aaKnown RBP6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 LUMP51884 338 aaPredicted RBP6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 RTL8BQ17RB0 113 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 TIMM50Q3ZCQ8 353 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 ACTBL2Q562R1 376 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 UNQ5815/PRO19632Q6UWF5 114 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 ZNF645Q8N7E2 425 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 GVQW1Q8N7I0 195 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 OR1N2Q8NGR9 330 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 ARPC1AQ92747 370 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 DPF1Q92782 380 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 HARBI1Q96MB7 349 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 ALX4Q9H161 411 aaPredicted RBP6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 AUNIPQ9H7T9 357 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 SCOCQ9UIL1 159 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 ANXA10Q9UJ72 324 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 OR2W1Q9Y3N9 320 aa6.8□□□□□ -1.32
SNRPA1-206ENST00000558059 CRYZL1O95825 349 aa6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 OR8U8P0C7N1 319 aa6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 PTHLHP12272 177 aa6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 LSM3P62310 102 aaKnown RBP6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 RPL30P62888 115 aaKnown RBP6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 ZNF616Q08AN1 781 aa6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 EIF4EBP1Q13541 118 aaPredicted RBP6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 PYHIN1Q6K0P9 492 aa6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 HOGA1Q86XE5 327 aa6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 TEX45Q8NA69 505 aa6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 GRPEL2Q8TAA5 225 aa6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 RHOVQ96L33 236 aa6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 MS4A10Q96PG2 267 aa6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 VCX3AQ9NNX9 186 aa6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 DIABLOQ9NR28 239 aa6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 RBMX2Q9Y388 322 aaKnown RBP6.79□□□□□ -1.32
SNRPA1-206ENST00000558059 SEC14L6B5MCN3 397 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 XRCC3O43542 346 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 SLC22A5O76082 557 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 CNIH1O95406 144 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 LGALS1P09382 135 aaKnown RBP6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 BRWD1-AS2P59051 145 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 UBE2KP61086 200 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 DGCR2P98153 550 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 CBX3Q13185 183 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 PRSS8Q16651 343 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 C9orf66Q5T8R8 295 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 IDO2Q6ZQW0 420 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 CROCCP3Q8IVE0 287 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 BEST4Q8NFU0 473 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 OR5T1Q8NG75 326 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 OSR1Q8TAX0 266 aaPredicted RBP6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 DCUN1D4Q92564 292 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 SLA2Q9H6Q3 261 aa6.78□□□□□ -1.32
SNRPA1-206ENST00000558059 IGHV4OR15-8A0A075B7B6 117 aa6.77□□□□□ -1.33
SNRPA1-206ENST00000558059 A0A087WW49 117 aa6.77□□□□□ -1.33
SNRPA1-206ENST00000558059 LINC01619G3V211 115 aa6.77□□□□□ -1.33
SNRPA1-206ENST00000558059 H3BUA1 57 aa6.77□□□□□ -1.33
SNRPA1-206ENST00000558059 RAMP3O60896 148 aa6.77□□□□□ -1.33
SNRPA1-206ENST00000558059 FCGR3BO75015 233 aa6.77□□□□□ -1.33
SNRPA1-206ENST00000558059 BRI3O95415 125 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms