RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 M0R2Z0 102 aa11.64□□□□□ -0.55
SEMA6D-208ENST00000558014 PGLYRP1O75594 196 aaPredicted RBP11.64□□□□□ -0.55
SEMA6D-208ENST00000558014 BTF3P20290 206 aaKnown RBP11.64□□□□□ -0.55
SEMA6D-208ENST00000558014 PSG7Q13046 419 aa11.64□□□□□ -0.55
SEMA6D-208ENST00000558014 PHLDA3Q9Y5J5 127 aa11.64□□□□□ -0.55
SEMA6D-208ENST00000558014 GREB1LQ9C091 1923 aaPredicted RBP11.64□□□□□ -0.55
SEMA6D-208ENST00000558014 MEOX2P50222 304 aa11.64□□□□□ -0.55
SEMA6D-208ENST00000558014 LHX2P50458 406 aa11.64□□□□□ -0.55
SEMA6D-208ENST00000558014 PRR30Q53SZ7 412 aaPredicted RBP11.64□□□□□ -0.55
SEMA6D-208ENST00000558014 OR10G8Q8NGN5 311 aa11.64□□□□□ -0.55
SEMA6D-208ENST00000558014 FAM53AQ6NSI3 398 aaPredicted RBP11.64□□□□□ -0.55
SEMA6D-208ENST00000558014 PPP1R27Q86WC6 154 aa11.64□□□□□ -0.55
SEMA6D-208ENST00000558014 TCF20Q9UGU0 1960 aaKnown RBP11.64□□□□□ -0.55
SEMA6D-208ENST00000558014 HIST1H1BP16401 226 aaKnown RBP11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 CLDN18P56856 261 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 IGLV3-21P80748 117 aaPredicted RBP11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 ACP7Q6ZNF0 438 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 WFIKKN1Q96NZ8 548 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 DMRTA2Q96SC8 542 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 FBXL7Q9UJT9 491 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 THADAQ6YHU6 1953 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 ICMTO60725 284 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 ZNF324O75467 553 aaPredicted RBP11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 RELQ04864 619 aaPredicted RBP11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 SP5Q6BEB4 398 aaPredicted RBP11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 PACRGQ96M98 296 aaPredicted RBP11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 MANBALQ9NQG1 85 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 PRB4P10163 310 aaPredicted RBP11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 CX3CL1P78423 397 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 ZNF56Q15929 161 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 FAM24BQ8N5W8 94 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 ARL6IP6Q8N6S5 226 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 SCN5AQ14524 2016 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 PSMB11A5LHX3 300 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 MARCH11A6NNE9 402 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 MUC1P15941 1255 aaPredicted RBP11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 CD69Q07108 199 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 EIF4E3Q8N5X7 224 aaKnown RBP11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 NPFFR1Q9GZQ6 430 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 MMP26Q9NRE1 261 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 SLC35B3Q9H1N7 401 aa11.63□□□□□ -0.55
SEMA6D-208ENST00000558014 SLC25A33Q9BSK2 321 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 DPH3P1Q9H4G8 78 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 FOXA2Q9Y261 457 aaPredicted RBP11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 FOXI3A8MTJ6 420 aaPredicted RBP11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 ABLIM2Q6H8Q1 611 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 WFDC12Q8WWY7 111 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 MIEN1Q9BRT3 115 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 HSPB7Q9UBY9 170 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 PTGDSP41222 190 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 LRP11Q86VZ4 500 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 BPIFA4PQ86YQ2 179 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 NPIPB3Q92617 1050 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 JPT1Q9UK76 154 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 RBBP6Q7Z6E9 1792 aaKnown RBP11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 DSPPQ9NZW4 1301 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 TEX261Q6UWH6 196 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 PARD6AQ9NPB6 346 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 VAMP3Q15836 100 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 DRAM1Q8N682 238 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 ZNF502Q8TBZ5 544 aa11.62□□□□□ -0.55
SEMA6D-208ENST00000558014 ACACAQ13085 2346 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 SRD5A1P18405 259 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 DLX1P56177 255 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 HIST3H3Q16695 136 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 BSXQ3C1V8 233 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 GLMPQ8WWB7 406 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 LSM10Q969L4 123 aaKnown RBP11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 NEURL2Q9BR09 285 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 KLK15Q9H2R5 256 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 ZNF430Q9H8G1 570 aaPredicted RBP11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 ALPK2Q86TB3 2170 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 CORTO00230 105 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 LY6HO94772 140 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 F12P00748 615 aaPredicted RBP11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 IER3P46695 156 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 NUTF2P61970 127 aaKnown RBP11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 C3orf56Q8N813 242 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 MYOZ3Q8TDC0 251 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 AQP3Q92482 292 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 SEMA5BQ9P283 1151 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 CLDN34H7C241 214 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 COX5BP10606 129 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 BRD3OSQ6XYD6 125 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 TMEM219Q86XT9 240 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 WDFY2Q96P53 400 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 MIXL1Q9H2W2 232 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 NTN3O00634 580 aaPredicted RBP11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 PHOX2AO14813 284 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 GCM2O75603 506 aaPredicted RBP11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 FAM209AQ5JX71 171 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 SDK2Q58EX2 2172 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 HKR1P10072 659 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 CXCL3P19876 107 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 C1QTNF12Q5T7M4 302 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 TMEM45BQ96B21 275 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 DUX3Q96PT4 197 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 LINC00470Q9BZP3 86 aa11.61□□□□□ -0.55
SEMA6D-208ENST00000558014 OR4C46A6NHA9 309 aa11.6□□□□□ -0.55
SEMA6D-208ENST00000558014 M0R3E3 92 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms