RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 F2RL1P55085 397 aa16.97■□□□□ 0.31
CASC4-204ENST00000557945 PIGPP57054 158 aa16.97■□□□□ 0.31
CASC4-204ENST00000557945 TBC1D26Q86UD7 250 aa16.97■□□□□ 0.31
CASC4-204ENST00000557945 POC5Q8NA72 575 aa16.97■□□□□ 0.31
CASC4-204ENST00000557945 OR4C13Q8NGP0 309 aa16.97■□□□□ 0.31
CASC4-204ENST00000557945 C1RLQ9NZP8 487 aa16.97■□□□□ 0.31
CASC4-204ENST00000557945 COPZ2Q9P299 210 aa16.97■□□□□ 0.31
CASC4-204ENST00000557945 LYRM1O43325 122 aa16.96■□□□□ 0.31
CASC4-204ENST00000557945 CNTFRP26992 372 aa16.96■□□□□ 0.31
CASC4-204ENST00000557945 KIR2DS2P43631 304 aa16.96■□□□□ 0.31
CASC4-204ENST00000557945 SPAG16Q8N0X2 631 aa16.96■□□□□ 0.31
CASC4-204ENST00000557945 CCDC71LQ8N9Z2 235 aa16.96■□□□□ 0.31
CASC4-204ENST00000557945 OR8H1Q8NGG4 311 aa16.96■□□□□ 0.31
CASC4-204ENST00000557945 OR4S2Q8NH73 311 aa16.96■□□□□ 0.31
CASC4-204ENST00000557945 TAF15Q92804 592 aaKnown RBP eCLIP16.96■□□□□ 0.31
CASC4-204ENST00000557945 NPFFR1Q9GZQ6 430 aa16.96■□□□□ 0.31
CASC4-204ENST00000557945 GPR132Q9UNW8 380 aa16.96■□□□□ 0.31
CASC4-204ENST00000557945 M0QZK8 103 aa16.95■□□□□ 0.3
CASC4-204ENST00000557945 SHOXO15266 292 aa16.95■□□□□ 0.3
CASC4-204ENST00000557945 RPL15P61313 204 aaKnown RBP16.95■□□□□ 0.3
CASC4-204ENST00000557945 RND3P61587 244 aa16.95■□□□□ 0.3
CASC4-204ENST00000557945 HARBI1Q96MB7 349 aa16.95■□□□□ 0.3
CASC4-204ENST00000557945 RNF5Q99942 180 aa16.95■□□□□ 0.3
CASC4-204ENST00000557945 SLC25A21Q9BQT8 299 aaPredicted RBP16.95■□□□□ 0.3
CASC4-204ENST00000557945 RTBDNQ9BSG5 229 aaPredicted RBP16.95■□□□□ 0.3
CASC4-204ENST00000557945 PLSCR3Q9NRY6 295 aa16.95■□□□□ 0.3
CASC4-204ENST00000557945 KIAA1456Q9P272 454 aa16.95■□□□□ 0.3
CASC4-204ENST00000557945 VSIG4Q9Y279 399 aa16.95■□□□□ 0.3
CASC4-204ENST00000557945 MPPED1O15442 326 aa16.94■□□□□ 0.3
CASC4-204ENST00000557945 NBR2O15453 112 aa16.94■□□□□ 0.3
CASC4-204ENST00000557945 BRWD1-AS2P59051 145 aa16.94■□□□□ 0.3
CASC4-204ENST00000557945 TMEM177Q53S58 311 aa16.94■□□□□ 0.3
CASC4-204ENST00000557945 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.94■□□□□ 0.3
CASC4-204ENST00000557945 TSNAXQ99598 290 aaKnown RBP16.94■□□□□ 0.3
CASC4-204ENST00000557945 C5orf66Q9H5L9 145 aa16.94■□□□□ 0.3
CASC4-204ENST00000557945 LIN7CQ9NUP9 197 aaKnown RBP16.94■□□□□ 0.3
CASC4-204ENST00000557945 SH2D7A6NKC9 451 aaPredicted RBP16.93■□□□□ 0.3
CASC4-204ENST00000557945 RAMP3O60896 148 aa16.93■□□□□ 0.3
CASC4-204ENST00000557945 F2RP25116 425 aa16.93■□□□□ 0.3
CASC4-204ENST00000557945 BLCAPP62952 87 aa16.93■□□□□ 0.3
CASC4-204ENST00000557945 IFITM3Q01628 133 aa16.93■□□□□ 0.3
CASC4-204ENST00000557945 RBMS2Q15434 407 aaKnown RBP16.93■□□□□ 0.3
CASC4-204ENST00000557945 TMED4Q7Z7H5 227 aa16.93■□□□□ 0.3
CASC4-204ENST00000557945 C5orf56Q8N8D9 126 aa16.93■□□□□ 0.3
CASC4-204ENST00000557945 Q8N9W7 124 aa16.93■□□□□ 0.3
CASC4-204ENST00000557945 OSR1Q8TAX0 266 aaPredicted RBP16.93■□□□□ 0.3
CASC4-204ENST00000557945 CD300LFQ8TDQ1 290 aa16.93■□□□□ 0.3
CASC4-204ENST00000557945 RASL11BQ9BPW5 248 aa16.93■□□□□ 0.3
CASC4-204ENST00000557945 TBC1D24Q9ULP9 559 aa16.93■□□□□ 0.3
CASC4-204ENST00000557945 TEX13DA0A0J9YY54 714 aaPredicted RBP16.92■□□□□ 0.3
CASC4-204ENST00000557945 FGF16O43320 207 aa16.92■□□□□ 0.3
CASC4-204ENST00000557945 BTCP35070 178 aa16.92■□□□□ 0.3
CASC4-204ENST00000557945 LGALS7P47929 136 aa16.92■□□□□ 0.3
CASC4-204ENST00000557945 ASAH1Q13510 395 aa16.92■□□□□ 0.3
CASC4-204ENST00000557945 PLGLAQ15195 96 aa16.92■□□□□ 0.3
CASC4-204ENST00000557945 KRTAP24-1Q3LI83 254 aa16.92■□□□□ 0.3
CASC4-204ENST00000557945 C9orf152Q5JTZ5 239 aa16.92■□□□□ 0.3
CASC4-204ENST00000557945 MZT2BQ6NZ67 158 aa16.92■□□□□ 0.3
CASC4-204ENST00000557945 C11orf88Q6PI97 169 aa16.92■□□□□ 0.3
CASC4-204ENST00000557945 ADAD2Q8NCV1 583 aaKnown RBP16.92■□□□□ 0.3
CASC4-204ENST00000557945 NPBQ8NG41 125 aa16.92■□□□□ 0.3
CASC4-204ENST00000557945 PRSS22Q9GZN4 317 aa16.92■□□□□ 0.3
CASC4-204ENST00000557945 RBFOX2O43251 390 aaKnown RBP eCLIP16.91■□□□□ 0.3
CASC4-204ENST00000557945 NDUFB6O95139 128 aa16.91■□□□□ 0.3
CASC4-204ENST00000557945 AMY1AP04745 511 aa16.91■□□□□ 0.3
CASC4-204ENST00000557945 AKR1C4P17516 323 aa16.91■□□□□ 0.3
CASC4-204ENST00000557945 RELBQ01201 579 aa16.91■□□□□ 0.3
CASC4-204ENST00000557945 PSG5Q15238 335 aa16.91■□□□□ 0.3
CASC4-204ENST00000557945 Q6ZSV7 163 aa16.91■□□□□ 0.3
CASC4-204ENST00000557945 FBXL15Q9H469 300 aa16.91■□□□□ 0.3
CASC4-204ENST00000557945 METTL1Q9UBP6 276 aaKnown RBP16.91■□□□□ 0.3
CASC4-204ENST00000557945 C3orf85A0A1B0GTC6 90 aa16.9■□□□□ 0.3
CASC4-204ENST00000557945 SRRM4A7MD48 611 aaKnown RBP16.9■□□□□ 0.3
CASC4-204ENST00000557945 RRHO14718 337 aa16.9■□□□□ 0.3
CASC4-204ENST00000557945 SLC25A17O43808 307 aa16.9■□□□□ 0.3
CASC4-204ENST00000557945 LPAR6P43657 344 aa16.9■□□□□ 0.3
CASC4-204ENST00000557945 RAG2P55895 527 aa16.9■□□□□ 0.3
CASC4-204ENST00000557945 C5orf64Q2M2E5 130 aa16.9■□□□□ 0.3
CASC4-204ENST00000557945 ARSJQ5FYB0 599 aaPredicted RBP16.9■□□□□ 0.3
CASC4-204ENST00000557945 TCTEX1D1Q8N7M0 179 aa16.9■□□□□ 0.3
CASC4-204ENST00000557945 RANBP3Q9H6Z4 567 aaPredicted RBP16.9■□□□□ 0.3
CASC4-204ENST00000557945 NAA60Q9H7X0 242 aa16.9■□□□□ 0.3
CASC4-204ENST00000557945 NDUFA3O95167 84 aa16.89■□□□□ 0.3
CASC4-204ENST00000557945 SPDEFO95238 335 aa16.89■□□□□ 0.3
CASC4-204ENST00000557945 HPRT1P00492 218 aa16.89■□□□□ 0.3
CASC4-204ENST00000557945 HRASP01112 189 aa16.89■□□□□ 0.3
CASC4-204ENST00000557945 IGLV2-23P01705 113 aa16.89■□□□□ 0.3
CASC4-204ENST00000557945 VSIG10L2P0DP72 767 aa16.89■□□□□ 0.3
CASC4-204ENST00000557945 HKR1P10072 659 aa16.89■□□□□ 0.3
CASC4-204ENST00000557945 DEFA1P59665 94 aa16.89■□□□□ 0.3
CASC4-204ENST00000557945 DEFA3P59666 94 aa16.89■□□□□ 0.3
CASC4-204ENST00000557945 VMA21Q3ZAQ7 101 aa16.89■□□□□ 0.3
CASC4-204ENST00000557945 FAM71E2Q8N5Q1 922 aa16.89■□□□□ 0.3
CASC4-204ENST00000557945 TMEM158Q8WZ71 300 aa16.89■□□□□ 0.3
CASC4-204ENST00000557945 ZNF702PQ9H963 129 aa16.89■□□□□ 0.3
CASC4-204ENST00000557945 ATRQ13535 2644 aa16.89■□□□□ 0.3
CASC4-204ENST00000557945 FAM240BA0A1B0GVZ2 78 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 CRYM-AS1A6NIL9 109 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 H0Y980 276 aa16.89■□□□□ 0.29
CASC4-204ENST00000557945 S1PR2O95136 353 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms