RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CT45A6P0DMU7 189 aa10.19□□□□□ -0.78
SHMT2-233ENST00000557529 CT45A5P0DMU8 189 aa10.19□□□□□ -0.78
SHMT2-233ENST00000557529 CT45A7P0DMV0 189 aa10.19□□□□□ -0.78
SHMT2-233ENST00000557529 HTR2BP41595 481 aa10.19□□□□□ -0.78
SHMT2-233ENST00000557529 CAV2P51636 162 aa10.19□□□□□ -0.78
SHMT2-233ENST00000557529 TAS2R30P59541 319 aa10.19□□□□□ -0.78
SHMT2-233ENST00000557529 MIDNQ504T8 468 aa10.19□□□□□ -0.78
SHMT2-233ENST00000557529 OR8H3Q8N146 312 aa10.19□□□□□ -0.78
SHMT2-233ENST00000557529 AIFM2Q9BRQ8 373 aa10.19□□□□□ -0.78
SHMT2-233ENST00000557529 NARFLQ9H6Q4 476 aa10.19□□□□□ -0.78
SHMT2-233ENST00000557529 BARX1Q9HBU1 254 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-233ENST00000557529 HSPB7Q9UBY9 170 aa10.19□□□□□ -0.78
SHMT2-233ENST00000557529 WSB1Q9Y6I7 421 aa10.19□□□□□ -0.78
SHMT2-233ENST00000557529 USP9XQ93008 2570 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-233ENST00000557529 MALRD1Q5VYJ5 2156 aa10.19□□□□□ -0.78
SHMT2-233ENST00000557529 HRNRQ86YZ3 2850 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-233ENST00000557529 YLPM1P49750 1951 aaKnown RBP10.18□□□□□ -0.78
SHMT2-233ENST00000557529 IGHV2-26A0A0B4J1V2 119 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 JTBO76095 146 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 NXPH3O95157 252 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 CRYZL1O95825 349 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 IGHV2-5P01817 119 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 TNFRSF9Q07011 255 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 BAXQ07812 192 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 CLLU1Q5K131 121 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 SP5Q6BEB4 398 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-233ENST00000557529 ALKAL2Q6UX46 152 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 ZNF525Q8N782 197 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 BEND2Q8NDZ0 799 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 SMIM8Q96KF7 97 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 CLEC7AQ9BXN2 247 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 GSX2Q9BZM3 304 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 CYTL1Q9NRR1 136 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 SLC35D1Q9NTN3 355 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 ONECUT1Q9UBC0 465 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 FBXL17Q9UF56 701 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 AMMECR1Q9Y4X0 333 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-233ENST00000557529 RELNP78509 3460 aa10.18□□□□□ -0.78
SHMT2-233ENST00000557529 BORCS7-ASMTA0A0B4J1R7 106 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 FAM24AA6NFZ4 105 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 ENSAO43768 121 aaKnown RBP10.17□□□□□ -0.78
SHMT2-233ENST00000557529 ATP6V1G1O75348 118 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 RBMXL2O75526 392 aaKnown RBP10.17□□□□□ -0.78
SHMT2-233ENST00000557529 LY86O95711 162 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 UBE2KP61086 200 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 EWSR1Q01844 656 aaKnown RBP eCLIP10.17□□□□□ -0.78
SHMT2-233ENST00000557529 POU2AF1Q16633 256 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 HLA-DRB5Q30154 266 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 AARDQ4LEZ3 155 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 EIF5AL1Q6IS14 154 aaKnown RBP10.17□□□□□ -0.78
SHMT2-233ENST00000557529 C1orf122Q6ZSJ8 110 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 TGIF2LXQ8IUE1 241 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 BAP18Q8IXM2 172 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 TMEM252Q8N6L7 170 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 KIR3DL3Q8N743 410 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 OR5AN1Q8NGI8 311 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 OR13D1Q8NGV5 346 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 ST6GALNAC6Q969X2 333 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 PCGF1Q9BSM1 259 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 MRPL20Q9BYC9 149 aaKnown RBP10.17□□□□□ -0.78
SHMT2-233ENST00000557529 ZNRD1Q9P1U0 126 aa10.17□□□□□ -0.78
SHMT2-233ENST00000557529 SPTAN1Q13813 2472 aaKnown RBP10.17□□□□□ -0.78
SHMT2-233ENST00000557529 IGSF23A1L1A6 192 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 A8MXK9 166 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 NDUFS8O00217 210 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 TMEM50AO95807 157 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 IGLV1-47P01700 117 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 RAB13P51153 203 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 PAX9P55771 341 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 STX12Q86Y82 276 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 PDPNQ86YL7 162 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 OR4A16Q8NH70 328 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 OSR1Q8TAX0 266 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-233ENST00000557529 RHOVQ96L33 236 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 CIB3Q96Q77 187 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-233ENST00000557529 NABP2Q9BQ15 211 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 PIMREGQ9BSJ6 248 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 BPESC1Q9GZL8 116 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 RBKSQ9H477 322 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 TMEM140Q9NV12 185 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 FLNCQ14315 2725 aa10.16□□□□□ -0.78
SHMT2-233ENST00000557529 H0YJW9 148 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 TXNL1O43396 289 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 OR9G9P0C7N8 305 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 PRTN3P24158 256 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 MC5RP33032 325 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 SULT1A1P50225 295 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 NHLH2Q02577 135 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 RPL7L1Q6DKI1 246 aaKnown RBP10.15□□□□□ -0.78
SHMT2-233ENST00000557529 SSX9Q7RTT3 188 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 UBAC2Q8NBM4 344 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 OR52E5Q8NH55 327 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 CLDND2Q8NHS1 167 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 FAM168AQ92567 244 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 MARVELD3Q96A59 401 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 SMIM3Q9BZL3 60 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 SLC25A32Q9H2D1 315 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 PSENENQ9NZ42 101 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 DOCK11Q5JSL3 2073 aa10.15□□□□□ -0.78
SHMT2-233ENST00000557529 RPS10-NUDT3A0A1W2PQS6 291 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms