RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 RNASEH2CQ8TDP1 164 aaKnown RBP3.91□□□□□ -1.78
ATXN3-246ENST00000557030 HIST1H2BHQ93079 126 aa3.91□□□□□ -1.78
ATXN3-246ENST00000557030 BTF3L4Q96K17 158 aa3.91□□□□□ -1.78
ATXN3-246ENST00000557030 PACRGQ96M98 296 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-246ENST00000557030 HIST1H2BNQ99877 126 aa3.91□□□□□ -1.78
ATXN3-246ENST00000557030 HIST1H2BMQ99879 126 aa3.91□□□□□ -1.78
ATXN3-246ENST00000557030 RARRES2Q99969 163 aa3.91□□□□□ -1.78
ATXN3-246ENST00000557030 C2orf88Q9BSF0 95 aa3.91□□□□□ -1.78
ATXN3-246ENST00000557030 PSMG3Q9BT73 122 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-246ENST00000557030 FAAP24Q9BTP7 215 aa3.91□□□□□ -1.78
ATXN3-246ENST00000557030 PARD6GQ9BYG4 376 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-246ENST00000557030 GPR173Q9NS66 373 aa3.91□□□□□ -1.78
ATXN3-246ENST00000557030 C19orf25Q9UFG5 118 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-246ENST00000557030 ERRFI1Q9UJM3 462 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-246ENST00000557030 NXT1Q9UKK6 140 aaKnown RBP3.91□□□□□ -1.78
ATXN3-246ENST00000557030 LIPGQ9Y5X9 500 aa3.91□□□□□ -1.78
ATXN3-246ENST00000557030 FAM186AA6NE01 2351 aa3.91□□□□□ -1.78
ATXN3-246ENST00000557030 CEP192Q8TEP8 1941 aa3.91□□□□□ -1.78
ATXN3-246ENST00000557030 ABCA7Q8IZY2 2146 aa3.91□□□□□ -1.78
ATXN3-246ENST00000557030 KNL1Q8NG31 2342 aa3.9□□□□□ -1.78
ATXN3-246ENST00000557030 FER1L5A0AVI2 2057 aa3.9□□□□□ -1.78
ATXN3-246ENST00000557030 TGIF2-C20orf24A0A0A6YYL0 155 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 IGHV3-20A0A0C4DH32 117 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 A0A1B0GU03 582 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 NKX2-6A6NCS4 301 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 GJE1A6NN92 205 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 H0Y980 276 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 H0YL77 283 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 TOX3O15405 576 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-246ENST00000557030 EFNA2O43921 213 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 SSSCA1O60232 199 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 NRASP01111 189 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 GCGP01275 180 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 TRGC2P03986 189 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 KLK3P07288 261 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-246ENST00000557030 CXCL1P09341 107 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 WNT2P09544 360 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 TRGC1P0CF51 173 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 BCL2P10415 239 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 FABP4P15090 132 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 PAX1P15863 534 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 AADACP22760 399 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 CRYGSP22914 178 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 ANOS1P23352 680 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 UCP1P25874 307 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 GNRHRP30968 328 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 OPRM1P35372 400 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 CEACAM6P40199 344 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 PTGDSP41222 190 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 CXCL12P48061 93 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 NPBWR2P48146 333 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 DYNLT3P51808 116 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 CEBPGP53567 150 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 CLDN15P56746 228 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 RBM11P57052 281 aaKnown RBP3.9□□□□□ -1.79
ATXN3-246ENST00000557030 LINC01547P58512 204 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-246ENST00000557030 CCL7P80098 99 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 SERF2P84101 59 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 JOSD1Q15040 202 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-246ENST00000557030 HAGHQ16775 308 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 MPV17LQ2QL34 196 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 FAM27BQ5VT28 67 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 TCEAL6Q6IPX3 200 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 TEX38Q6PEX7 206 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 SPNS3Q6ZMD2 512 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 SHISA6Q6ZSJ9 500 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 MRPL52Q86TS9 123 aaKnown RBP3.9□□□□□ -1.79
ATXN3-246ENST00000557030 TGIF2LYQ8IUE0 185 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 TUSC5Q8IXB3 177 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 TMEM183AQ8IXX5 376 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 SAXO1Q8IYX7 474 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 MAML2Q8IZL2 1156 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-246ENST00000557030 SELENOHQ8IZQ5 122 aaKnown RBP3.9□□□□□ -1.79
ATXN3-246ENST00000557030 GCSAMQ8N6F7 178 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 TMEM105Q8N8V8 129 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 FADS6Q8N9I5 356 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 OR10AD1Q8NGE0 317 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 OR10A7Q8NGE5 316 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 OR5D13Q8NGL4 314 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 OR5C1Q8NGR4 320 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 OR2V1Q8NHB1 315 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 MBD3L1Q8WWY6 194 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 PINX1Q96BK5 328 aaKnown RBP3.9□□□□□ -1.79
ATXN3-246ENST00000557030 SPACA9Q96E40 222 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-246ENST00000557030 ACY3Q96HD9 319 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 REEP6Q96HR9 211 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 C14orf144Q96I85 54 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 RAB40CQ96S21 281 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 SSX3Q99909 188 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 AGMATQ9BSE5 352 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 HDHD3Q9BSH5 251 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-246ENST00000557030 GPR61Q9BZJ8 451 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 ULBP2Q9BZM5 246 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 RIMS4Q9H426 269 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-246ENST00000557030 ZNF442Q9H7R0 627 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 SRD5A3Q9H8P0 318 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 CDH20Q9HBT6 801 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 FGF21Q9NSA1 209 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 PLEK2Q9NYT0 353 aa3.9□□□□□ -1.79
ATXN3-246ENST00000557030 ST3GAL6Q9Y274 331 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms