RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 ECSCRQ19T08 205 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 CDNFQ49AH0 187 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 ACTBL2Q562R1 376 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 C9orf66Q5T8R8 295 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 ZNF562Q6V9R5 426 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 GLDNQ6ZMI3 551 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-222ENST00000556768 PDPNQ86YL7 162 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 OR11H1Q8NG94 326 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 FBXL15Q9H469 300 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 VCX3AQ9NNX9 186 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 TXNL4BQ9NX01 149 aaKnown RBP5.73□□□□□ -1.49
SCFD1-222ENST00000556768 METTL1Q9UBP6 276 aaKnown RBP5.73□□□□□ -1.49
SCFD1-222ENST00000556768 DAPK2Q9UIK4 370 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 FOXA2Q9Y261 457 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-222ENST00000556768 A3GALT2U3KPV4 340 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 TRBV6-7A0A0A0MS04 114 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 A0A1W2PN81 502 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 G3V318 75 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 RAB27BO00194 218 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 SLC22A5O76082 557 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 GSTT2P0CG29 244 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 GSTT2BP0CG30 244 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 RRASP10301 218 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 DTYMKP23919 212 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 PPIFP30405 207 aaKnown RBP5.72□□□□□ -1.49
SCFD1-222ENST00000556768 CHRNA7P36544 502 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 INSL3P51460 131 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 DGCR2P98153 550 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 CFHR3Q02985 330 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 ZNF616Q08AN1 781 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 DEFB136Q30KP8 78 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 TIMM50Q3ZCQ8 353 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 AKIRIN2Q53H80 203 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 IGSF11Q5DX21 431 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 ZNF773Q6PK81 442 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 C18orf65Q6ZTR6 163 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 PPP1R27Q86WC6 154 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 CCDC28AQ8IWP9 274 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 OR1N2Q8NGR9 330 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 ADTRPQ96IZ2 230 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 DUX3Q96PT4 197 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 CLCC1Q96S66 551 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 ST6GALNAC5Q9BVH7 336 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 PARP12Q9H0J9 701 aaKnown RBP5.72□□□□□ -1.49
SCFD1-222ENST00000556768 OR2D2Q9H210 308 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 DCSTAMPQ9H295 470 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 SEPSECSQ9HD40 501 aaKnown RBP5.72□□□□□ -1.49
SCFD1-222ENST00000556768 ZNF355PQ9NSJ1 428 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 SLC35D1Q9NTN3 355 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 GAB2Q9UQC2 676 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 KCNK7Q9Y2U2 307 aa5.72□□□□□ -1.49
SCFD1-222ENST00000556768 LOC100506127A0A0U1RQW1 187 aa5.71□□□□□ -1.49
SCFD1-222ENST00000556768 SEC14L6B5MCN3 397 aa5.71□□□□□ -1.49
SCFD1-222ENST00000556768 IGKV1-16P04430 117 aa5.71□□□□□ -1.49
SCFD1-222ENST00000556768 GNG2P59768 71 aa5.71□□□□□ -1.49
SCFD1-222ENST00000556768 EGFEM1PQ0D2K5 195 aa5.71□□□□□ -1.49
SCFD1-222ENST00000556768 PSG5Q15238 335 aa5.71□□□□□ -1.49
SCFD1-222ENST00000556768 MOGAT2Q3SYC2 334 aa5.71□□□□□ -1.49
SCFD1-222ENST00000556768 HACD4Q5VWC8 232 aa5.71□□□□□ -1.49
SCFD1-222ENST00000556768 UNQ5815/PRO19632Q6UWF5 114 aa5.71□□□□□ -1.49
SCFD1-222ENST00000556768 ZNF491Q8N8L2 437 aa5.71□□□□□ -1.49
SCFD1-222ENST00000556768 MINDY2Q8NBR6 621 aa5.71□□□□□ -1.49
SCFD1-222ENST00000556768 RBMXL1Q96E39 390 aaKnown RBP5.71□□□□□ -1.49
SCFD1-222ENST00000556768 CYYR1Q96J86 154 aa5.71□□□□□ -1.49
SCFD1-222ENST00000556768 TMEM68Q96MH6 324 aa5.71□□□□□ -1.49
SCFD1-222ENST00000556768 KLK15Q9H2R5 256 aa5.71□□□□□ -1.49
SCFD1-222ENST00000556768 SLA2Q9H6Q3 261 aa5.71□□□□□ -1.49
SCFD1-222ENST00000556768 ZNF230Q9UIE0 474 aaPredicted RBP5.71□□□□□ -1.49
SCFD1-222ENST00000556768 RRP15Q9Y3B9 282 aaKnown RBP5.71□□□□□ -1.49
SCFD1-222ENST00000556768 IGKV1-6A0A0C4DH72 117 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 A0A0G2JLM5 398 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 MFNGO00587 321 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 FCN1O00602 326 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 ARPC1BO15143 372 aaKnown RBP5.71□□□□□ -1.5
SCFD1-222ENST00000556768 SLC25A17O43808 307 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 CREBL2O60519 120 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-222ENST00000556768 CD36P16671 472 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 LUMP51884 338 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-222ENST00000556768 GNB1P62873 340 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 RUNX1Q01196 453 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 MXD1Q05195 221 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 FXYD3Q14802 87 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 ZNF260Q3ZCT1 412 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 SFXN4Q6P4A7 337 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 Q6ZS49 121 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 ZNF383Q8NA42 475 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 LFNGQ8NES3 379 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 MAFIPQ8WZ33 124 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 ARPC1AQ92747 370 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 HARBI1Q96MB7 349 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 OR5B12Q96R08 314 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 DCUN1D5Q9BTE7 237 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 CABLES2Q9BTV7 478 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 TOLLIPQ9H0E2 274 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 DIABLOQ9NR28 239 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 SDHAF2Q9NX18 166 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 PRELID3BQ9Y3B1 194 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 NUBP2Q9Y5Y2 271 aa5.71□□□□□ -1.5
SCFD1-222ENST00000556768 A0A0B4J203 849 aa5.7□□□□□ -1.5
SCFD1-222ENST00000556768 SMIM30A4D0T7 59 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms