RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 EGR2P11161 476 aaPredicted RBP8.09□□□□□ -1.11
SNX6-208ENST00000556712 ELK1P19419 428 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 FCGR2CP31995 323 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 ALDH3B2P48448 385 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 RAB25P57735 213 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 FXYD4P59646 89 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 CBX3Q13185 183 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 TMEM177Q53S58 311 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 KPRPQ5T749 579 aaPredicted RBP8.09□□□□□ -1.11
SNX6-208ENST00000556712 ZNF660Q6AZW8 331 aaPredicted RBP8.09□□□□□ -1.11
SNX6-208ENST00000556712 IDO2Q6ZQW0 420 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 GPR141Q7Z602 305 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 RNF152Q8N8N0 203 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 SECTM1Q8WVN6 248 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 ARPC1AQ92747 370 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 KCTD12Q96CX2 325 aaKnown RBP8.09□□□□□ -1.11
SNX6-208ENST00000556712 OR5B12Q96R08 314 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 RNF5Q99942 180 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 GNB4Q9HAV0 340 aa8.09□□□□□ -1.11
SNX6-208ENST00000556712 FCGR3BO75015 233 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 PPYP01298 95 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 CRYGBP07316 175 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 CBX5P45973 191 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 CRIP2P52943 208 aaPredicted RBP8.08□□□□□ -1.12
SNX6-208ENST00000556712 DEFA5Q01523 94 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 TAGLNQ01995 201 aaKnown RBP8.08□□□□□ -1.12
SNX6-208ENST00000556712 EIF4EBP1Q13541 118 aaPredicted RBP8.08□□□□□ -1.12
SNX6-208ENST00000556712 FXYD3Q14802 87 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 CDK10Q15131 360 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 RNASE12Q5GAN4 147 aaKnown RBP8.08□□□□□ -1.12
SNX6-208ENST00000556712 UNQ5815/PRO19632Q6UWF5 114 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 PPP1R27Q86WC6 154 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 TMEM17Q86X19 198 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 SNX29P2Q8IUI4 249 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 MINDY2Q8NBR6 621 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 LFNGQ8NES3 379 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 WFDC9Q8NEX5 89 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 MYOZ3Q8TDC0 251 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 C4orf3Q8WVX3 66 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 TCTEX1D2Q8WW35 142 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 ADTRPQ96IZ2 230 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 P2RX4Q99571 388 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 ALX4Q9H161 411 aaPredicted RBP8.08□□□□□ -1.12
SNX6-208ENST00000556712 CCL28Q9NRJ3 127 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 NECAP2Q9NVZ3 263 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 TAS2R8Q9NYW2 309 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 EHFQ9NZC4 300 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 ANAPC10Q9UM13 185 aa8.08□□□□□ -1.12
SNX6-208ENST00000556712 FAM25AB3EWG3 89 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 FAM25CB3EWG5 89 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 FAM25GB3EWG6 89 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 CCL24O00175 119 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 APOA1P02647 267 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 PMP2P02689 132 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 SAA1P0DJI8 122 aaPredicted RBP8.07□□□□□ -1.12
SNX6-208ENST00000556712 APELAP0DMC3 54 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 RRASP10301 218 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 HOXD3P31249 432 aaPredicted RBP8.07□□□□□ -1.12
SNX6-208ENST00000556712 PRSS3P35030 304 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 MYCNOSP40205 109 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 CDX1P47902 265 aaPredicted RBP8.07□□□□□ -1.12
SNX6-208ENST00000556712 LGALS7P47929 136 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 RFX2P48378 723 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 RAB9AP51151 201 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 RORCP51449 518 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 KIAA0141Q14154 515 aaPredicted RBP8.07□□□□□ -1.12
SNX6-208ENST00000556712 SPCS2Q15005 226 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 MRGPRG-AS1Q2M3A8 158 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 ACTBL2Q562R1 376 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 FOXB2Q5VYV0 432 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 TMEM65Q6PI78 240 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 ZNF562Q6V9R5 426 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 OVCH2Q7RTZ1 564 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 CLVS1Q8IUQ0 354 aaPredicted RBP8.07□□□□□ -1.12
SNX6-208ENST00000556712 VKORC1L1Q8N0U8 176 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 ZNF491Q8N8L2 437 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 OR5AP2Q8NGF4 316 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 MS4A10Q96PG2 267 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 DCUN1D5Q9BTE7 237 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 SLC5A7Q9GZV3 580 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 FOXA2Q9Y261 457 aaPredicted RBP8.07□□□□□ -1.12
SNX6-208ENST00000556712 MRPS7Q9Y2R9 242 aaKnown RBP8.07□□□□□ -1.12
SNX6-208ENST00000556712 NUBP2Q9Y5Y2 271 aa8.07□□□□□ -1.12
SNX6-208ENST00000556712 NOTCH3Q9UM47 2321 aa8.06□□□□□ -1.12
SNX6-208ENST00000556712 CNIH1O95406 144 aa8.06□□□□□ -1.12
SNX6-208ENST00000556712 HLA-DMAP28067 261 aa8.06□□□□□ -1.12
SNX6-208ENST00000556712 SLC6A1P30531 599 aa8.06□□□□□ -1.12
SNX6-208ENST00000556712 BRWD1-AS2P59051 145 aa8.06□□□□□ -1.12
SNX6-208ENST00000556712 TNXAQ16473 311 aa8.06□□□□□ -1.12
SNX6-208ENST00000556712 VMA21Q3ZAQ7 101 aa8.06□□□□□ -1.12
SNX6-208ENST00000556712 C10orf55Q5SWW7 151 aa8.06□□□□□ -1.12
SNX6-208ENST00000556712 ASPHD1Q5U4P2 390 aa8.06□□□□□ -1.12
SNX6-208ENST00000556712 ACOT12Q8WYK0 555 aa8.06□□□□□ -1.12
SNX6-208ENST00000556712 RCC1LQ96I51 464 aaKnown RBP8.06□□□□□ -1.12
SNX6-208ENST00000556712 FXYD6Q9H0Q3 95 aa8.06□□□□□ -1.12
SNX6-208ENST00000556712 AURKAIP1Q9NWT8 199 aaPredicted RBP8.06□□□□□ -1.12
SNX6-208ENST00000556712 VSIG4Q9Y279 399 aa8.06□□□□□ -1.12
SNX6-208ENST00000556712 PRELID3BQ9Y3B1 194 aa8.06□□□□□ -1.12
SNX6-208ENST00000556712 I3L521 148 aa8.05□□□□□ -1.12
SNX6-208ENST00000556712 RAMP3O60896 148 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms