RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 FN1P02751 2386 aaKnown RBP9.05□□□□□ -0.96
FOXN3-212ENST00000556541 ANK3Q12955 4377 aaKnown RBP9.04□□□□□ -0.96
FOXN3-212ENST00000556541 DUXBA0A1W2PPF3 345 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 PEX14O75381 377 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 HPRT1P00492 218 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 MOSP00540 346 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 H2AFB2P0C5Z0 115 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 BRWD1-AS2P59051 145 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 RPL30P62888 115 aaKnown RBP9.04□□□□□ -0.96
FOXN3-212ENST00000556541 PHLDA2Q53GA4 152 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 MOB3BQ86TA1 216 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 BCL6BQ8N143 479 aaPredicted RBP9.04□□□□□ -0.96
FOXN3-212ENST00000556541 LRTM2Q8N967 370 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 CHPT1Q8WUD6 406 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 TCTEX1D2Q8WW35 142 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 ZNF48Q96MX3 618 aaPredicted RBP9.04□□□□□ -0.96
FOXN3-212ENST00000556541 JMJD8Q96S16 334 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 SSX3Q99909 188 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 TMEM222Q9H0R3 208 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 NUDT15Q9NV35 164 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 TCF19Q9Y242 345 aa9.04□□□□□ -0.96
FOXN3-212ENST00000556541 A0A0B4J2A0 478 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 C3orf85A0A1B0GTC6 90 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 A6NDX4 124 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 BTBD17A6NE02 478 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 M0QZK8 103 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 ARPC1BO15143 372 aaKnown RBP9.03□□□□□ -0.96
FOXN3-212ENST00000556541 FGF16O43320 207 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 ATG12O94817 140 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 OR2F2O95006 317 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 NDUFA3O95167 84 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 RLN1P04808 185 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 ANXA3P12429 323 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 REG1BP48304 166 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 SUPT4H1P63272 117 aaKnown RBP9.03□□□□□ -0.96
FOXN3-212ENST00000556541 RBMS3Q6XE24 437 aaKnown RBP9.03□□□□□ -0.96
FOXN3-212ENST00000556541 IL17RELQ6ZVW7 336 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 ADAD2Q8NCV1 583 aaKnown RBP9.03□□□□□ -0.96
FOXN3-212ENST00000556541 NPBQ8NG41 125 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 ZNF418Q8TF45 676 aaPredicted RBP9.03□□□□□ -0.96
FOXN3-212ENST00000556541 ZDHHC16Q969W1 377 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 FLYWCH2Q96CP2 140 aaKnown RBP9.03□□□□□ -0.96
FOXN3-212ENST00000556541 EAF1Q96JC9 268 aaPredicted RBP9.03□□□□□ -0.96
FOXN3-212ENST00000556541 TMEM56Q96MV1 263 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 TSNAXQ99598 290 aaKnown RBP9.03□□□□□ -0.96
FOXN3-212ENST00000556541 RAB18Q9NP72 206 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 C1RLQ9NZP8 487 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 SHPKQ9UHJ6 478 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 VPREB3Q9UKI3 123 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 TMEM56-RWDD3S4R434 201 aa9.03□□□□□ -0.96
FOXN3-212ENST00000556541 TEX13DA0A0J9YY54 714 aaPredicted RBP9.02□□□□□ -0.97
FOXN3-212ENST00000556541 SNRPGP15A8MWD9 76 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 SFT2D2O95562 160 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 DUS4LO95620 317 aaKnown RBP9.02□□□□□ -0.97
FOXN3-212ENST00000556541 CDS2O95674 445 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 DHFRP00374 187 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 HRASP01112 189 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 IFNA2P01563 188 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 IGKV1D-33P01593 117 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 IGKV1-33P01594 117 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 SNRNP70P08621 437 aaKnown RBP9.02□□□□□ -0.97
FOXN3-212ENST00000556541 OR4E1P0C645 316 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 PI3P19957 117 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 HILS1P60008 231 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 TMEM187Q14656 261 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 ZNF585BQ52M93 769 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 CCBE1Q6UXH8 406 aaPredicted RBP9.02□□□□□ -0.97
FOXN3-212ENST00000556541 LYG2Q86SG7 212 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 SPAG16Q8N0X2 631 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 SIGLECL1Q8N7X8 197 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 DRAXINQ8NBI3 349 aaPredicted RBP9.02□□□□□ -0.97
FOXN3-212ENST00000556541 OR51H1Q8NH63 302 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 GLYATL2Q8WU03 294 aa9.02□□□□□ -0.97
FOXN3-212ENST00000556541 RBM14Q96PK6 669 aaKnown RBP9.02□□□□□ -0.97
FOXN3-212ENST00000556541 NIPBLQ6KC79 2804 aaeCLIP9.02□□□□□ -0.97
FOXN3-212ENST00000556541 C9orf170A2RU37 121 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 C7orf66A4D0T2 115 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 INMT-MINDY4F8WBC2 141 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 H3BUX3 64 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 TNFSF12O43508 249 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 FCGR3BO75015 233 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 IGKV1-16P04430 117 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 SERPINE2P07093 398 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 IL6RP08887 468 aaPredicted RBP9.01□□□□□ -0.97
FOXN3-212ENST00000556541 OR5AC1P0C628 307 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 VSIG10L2P0DP72 767 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 NQO2P16083 231 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 AKR1C4P17516 323 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 UBE2KP61086 200 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 DHRS2Q13268 280 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 PPP1R1AQ13522 171 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 GLDNQ6ZMI3 551 aaPredicted RBP9.01□□□□□ -0.97
FOXN3-212ENST00000556541 TMED4Q7Z7H5 227 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 FAM219AQ8IW50 185 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 TEX45Q8NA69 505 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 OR4A5Q8NH83 315 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 VSTM2AQ8TAG5 236 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 MITD1Q8WV92 249 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 CAPSLQ8WWF8 208 aa9.01□□□□□ -0.97
FOXN3-212ENST00000556541 RBPMSQ93062 196 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms