RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 MOB1BQ7L9L4 216 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 CASTOR1Q8WTX7 329 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 GGHQ92820 318 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 CMTM3Q96MX0 182 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 RIMS4Q9H426 269 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-220ENST00000556486 SLA2Q9H6Q3 261 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 PLCXD1Q9NUJ7 323 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 ABRACLQ9P1F3 81 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 RNF150Q9ULK6 438 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 A0A1W2PN81 502 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 MARCH11A6NNE9 402 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 H0YJW9 148 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 UBE2CO00762 179 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 SPDEFO95238 335 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 BRI3O95415 125 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 BAG2O95816 211 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 LY6G6CO95867 125 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 HSPB1P04792 205 aaKnown RBP7.65□□□□□ -1.18
SCFD1-220ENST00000556486 TFAP2AP05549 437 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 IL6RP08887 468 aaPredicted RBP7.65□□□□□ -1.18
SCFD1-220ENST00000556486 CHRNA7P36544 502 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 QRFPP83859 136 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 IRF3Q14653 427 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 HAGHQ16775 308 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 RNLSQ5VYX0 342 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 LAIR2Q6ISS4 152 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 FAM131AQ6UXB0 335 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 C5orf24Q7Z6I8 188 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 MS4A15Q8N5U1 240 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 KCNG3Q8TAE7 436 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 FAM46BQ96A09 425 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 PTX4Q96A99 478 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 FLYWCH2Q96CP2 140 aaKnown RBP7.65□□□□□ -1.18
SCFD1-220ENST00000556486 NEDD4LQ96PU5 975 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 TMEM59Q9BXS4 323 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 FKBP14Q9NWM8 211 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 PSORS1C1Q9UIG5 152 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 WASHC3Q9Y3C0 194 aa7.65□□□□□ -1.18
SCFD1-220ENST00000556486 IGHV4OR15-8A0A075B7B6 117 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 A0A087WW49 117 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 TMEM14DPA8MWL7 114 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 H3BUA1 57 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 FCN1O00602 326 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 SLC22A1O15245 554 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 HSPA12AO43301 675 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 PROP1O75360 226 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 IGLV1-51P01701 117 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 ARSBP15848 533 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 HTR2CP28335 458 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 UNC119Q13432 240 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 ECSCRQ19T08 205 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 ACTBL2Q562R1 376 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 C6orf201Q7Z4U5 140 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 LRRTM1Q86UE6 522 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 FAM89BQ8N5H3 189 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 NANOGP1Q8N7R0 232 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 TMEM116Q8NCL8 245 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 CYGBQ8WWM9 190 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 DDB2Q92466 427 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 FAAP24Q9BTP7 215 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 FBXL15Q9H469 300 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 PEMTQ9UBM1 199 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 MGAT4AQ9UM21 535 aa7.64□□□□□ -1.19
SCFD1-220ENST00000556486 PNMA8CA0A1B0GUJ8 204 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 GAGE12BA1L429 117 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 GAGE12HA6NDE8 117 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 FOXI3A8MTJ6 420 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-220ENST00000556486 MYL12BO14950 172 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 SLC25A17O43808 307 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 MBPP02686 304 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-220ENST00000556486 IFNA6P05013 189 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 ZBTB25P24278 435 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 CD40LGP29965 261 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 PITPNAQ00169 270 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 MOGAT2Q3SYC2 334 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 ACSM3Q53FZ2 586 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 RPL39P5Q59GN2 51 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 GLT8D1Q68CQ7 371 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 OR10K2Q6IF99 312 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 PPP1R27Q86WC6 154 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 SGPP2Q8IWX5 399 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 DHRSXQ8N5I4 330 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 OR6M1Q8NGM8 313 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 IL1F10Q8WWZ1 152 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 LINC00476Q8WZB0 136 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 TMED9Q9BVK6 235 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 PARP12Q9H0J9 701 aaKnown RBP7.63□□□□□ -1.19
SCFD1-220ENST00000556486 STUB1Q9UNE7 303 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 GAB2Q9UQC2 676 aa7.63□□□□□ -1.19
SCFD1-220ENST00000556486 DNAH10Q8IVF4 4471 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 TNCP24821 2201 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 OR2C1O95371 312 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 IGKV1-16P04430 117 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 GNAO1P09471 354 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 UCHL1P09936 223 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 ZP3P21754 424 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 HLA-DRB3P79483 266 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 SSBP2P81877 361 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-220ENST00000556486 INSL4Q14641 139 aa7.62□□□□□ -1.19
SCFD1-220ENST00000556486 PLGLAQ15195 96 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms