RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ATG12O94817 140 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 CDS2O95674 445 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 CYB5R3P00387 301 aaPredicted RBP5.63□□□□□ -1.51
SLIRP-204ENST00000555890 TFF1P04155 84 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 SERPINE2P07093 398 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 OR8U9P0C7N5 309 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 PPIAL4FP0DN26 164 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 LYL1P12980 280 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 F2RP25116 425 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 UCP1P25874 307 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 P2RX3P56373 397 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 EDDM3BP56851 147 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 CCL8P80075 99 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 HTD2P86397 168 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 IL15RAQ13261 267 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 TMEM268Q5VZI3 342 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 TEX36Q5VZQ5 186 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 STUMQ69YW2 141 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 THOC7Q6I9Y2 204 aaKnown RBP5.63□□□□□ -1.51
SLIRP-204ENST00000555890 LYZL2Q7Z4W2 148 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 SELENOHQ8IZQ5 122 aaKnown RBP5.63□□□□□ -1.51
SLIRP-204ENST00000555890 DEFB108BQ8NET1 73 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 OR13A1Q8NGR1 328 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 OR8U1Q8NH10 309 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 OR1L1Q8NH94 360 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 ABHD5Q8WTS1 349 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 FAM216AQ8WUB2 273 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 TP53RKQ96S44 253 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 RNF126Q9BV68 326 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 HEXA-AS1Q9H8Q6 139 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 OR2S2Q9NQN1 319 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 ZC4H2Q9NQZ6 224 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 PPIAL4AQ9Y536 164 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 DSCAMO60469 2012 aa5.63□□□□□ -1.51
SLIRP-204ENST00000555890 DSCAML1Q8TD84 2053 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 TRGV10A0A0A0MS01 117 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 A6NNC1 897 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 MPTX1A8MV57 137 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 E5RGE8 158 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 SIGLEC5O15389 551 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 ST8SIA3O43173 380 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 TNFSF12O43508 249 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 BCL2L11O43521 198 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 VDAC1P21796 283 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 S100A1P23297 94 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 HTR2BP41595 481 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 UBA52P62987 128 aaKnown RBP5.62□□□□□ -1.51
SLIRP-204ENST00000555890 EIF5AP63241 154 aaKnown RBP5.62□□□□□ -1.51
SLIRP-204ENST00000555890 CATR1Q13166 79 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 EXOSC2Q13868 293 aaKnown RBP5.62□□□□□ -1.51
SLIRP-204ENST00000555890 TMEM30BQ3MIR4 351 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 ZNF672Q499Z4 452 aaPredicted RBP5.62□□□□□ -1.51
SLIRP-204ENST00000555890 PRSS57Q6UWY2 283 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 ZNF788Q6ZQV5 615 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 FOXRED2Q8IWF2 684 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 OR8H3Q8N146 312 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 ZNF645Q8N7E2 425 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 TCTEX1D1Q8N7M0 179 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 TPRX1Q8N7U7 411 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 SLC35G3Q8N808 338 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 ZNRF1Q8ND25 227 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 OR52L2PQ8NGH6 319 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 RNASE11Q8TAA1 199 aaKnown RBP5.62□□□□□ -1.51
SLIRP-204ENST00000555890 RFESDQ8TAC1 157 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 UBALD1Q8TB05 177 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 RBPMSQ93062 196 aaKnown RBP5.62□□□□□ -1.51
SLIRP-204ENST00000555890 RNF125Q96EQ8 232 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 ABHD14BQ96IU4 210 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 GAFA1Q96PS6 74 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 CCL13Q99616 98 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 UNKLQ9H9P5 680 aaKnown RBP5.62□□□□□ -1.51
SLIRP-204ENST00000555890 PLEKHA2Q9HB19 425 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 YAE1D1Q9NRH1 226 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 LIN7CQ9NUP9 197 aaKnown RBP5.62□□□□□ -1.51
SLIRP-204ENST00000555890 GNG12Q9UBI6 72 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 JPT1Q9UK76 154 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 NSG2Q9Y328 171 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 LSM5Q9Y4Y9 91 aaKnown RBP5.62□□□□□ -1.51
SLIRP-204ENST00000555890 RNF114Q9Y508 228 aa5.62□□□□□ -1.51
SLIRP-204ENST00000555890 IGHV1-69-2A0A0G2JMI3 117 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 A0A1B0GW55 424 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 hADV38S2A0JD32 116 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 ZNF729A6NN14 1252 aaPredicted RBP5.61□□□□□ -1.51
SLIRP-204ENST00000555890 H0YIZ8 118 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 C15orf65H3BRN8 121 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 TMEM178BH3BS89 294 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 TAAR5O14804 337 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 NDUFB3O43676 98 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 NDUFA2O43678 99 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 YPEL1O60688 119 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 GYPAP02724 150 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 DUX4L2P0CJ85 424 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 DUX4L3P0CJ86 424 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 DUX4L4P0CJ87 422 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 DUX4L5P0CJ88 424 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 DUX4L6P0CJ89 424 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 DUX4L7P0CJ90 424 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 SLC25A6P12236 298 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 PVALBP20472 110 aaPredicted RBP5.61□□□□□ -1.51
SLIRP-204ENST00000555890 SSTR5P35346 364 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms