RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 KITLGP21583 273 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 SSTR5P35346 364 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 GPR12P47775 334 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 ERVK-16P61578 105 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 HTD2P86397 168 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 PYY3Q5JQD4 70 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 FAM209BQ5JX69 171 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 PRAMEF6Q5VXH4 476 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 C16orf82Q7Z2V1 217 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 HIST3H2BBQ8N257 126 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 FRZBQ92765 325 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 R3HDM4Q96D70 268 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 NEIL1Q96FI4 390 aaPredicted RBP5.85□□□□□ -1.47
TDP1-213ENST00000555880 PITPNC1Q9UKF7 332 aa5.85□□□□□ -1.47
TDP1-213ENST00000555880 IFITM10A6NMD0 228 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 FAM90A9PA6NNJ1 464 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 VENTXO95231 258 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 HRASP01112 189 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 IGKV1D-33P01593 117 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 IGKV1-33P01594 117 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 CD55P08174 381 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 FABP4P15090 132 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 GALR1P47211 349 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 CDC34P49427 236 aaPredicted RBP5.84□□□□□ -1.47
TDP1-213ENST00000555880 FABP6P51161 128 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 GNB2P62879 340 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 TFF3Q07654 80 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 EDDM3AQ14507 147 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 VWC2Q2TAL6 325 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 PDZD11Q5EBL8 140 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 DNLZQ5SXM8 178 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 SAMD5Q5TGI4 173 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 PIP4P1Q86T03 277 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 TGIF2LYQ8IUE0 185 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 C11orf53Q8IXP5 236 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 OR13A1Q8NGR1 328 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 OR4A16Q8NH70 328 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 RFESDQ8TAC1 157 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 PPP1R35Q8TAP8 253 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 RAB24Q969Q5 203 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 SARAFQ96BY9 339 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 ANAPC16Q96DE5 110 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 C5orf30Q96GV9 206 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 SNX22Q96L94 193 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 SSX3Q99909 188 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 GPR61Q9BZJ8 451 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 PARLQ9H300 379 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 SRD5A3Q9H8P0 318 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 GNG12Q9UBI6 72 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 GAB2Q9UQC2 676 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 TTC28Q96AY4 2481 aa5.84□□□□□ -1.47
TDP1-213ENST00000555880 IGHV3-43A0A0B4J1X8 118 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 LINC00473A8K010 186 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 DEFB108AA8MXU0 73 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 C11orf94C9JXX5 98 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 AQP7O14520 342 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 GATCO43716 136 aaKnown RBP5.83□□□□□ -1.48
TDP1-213ENST00000555880 PDE6DO43924 150 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 MPDU1O75352 247 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 SOD3P08294 240 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 FTH1P19P0C7X4 201 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 CECR9P0C854 216 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 IGHV3-43DP0DP04 118 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 GZMHP20718 246 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 CD1BP29016 333 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 PRDX2P32119 198 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 CCL11P51671 97 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 FAM3BP58499 235 aaPredicted RBP5.83□□□□□ -1.48
TDP1-213ENST00000555880 RPL23P62829 140 aaKnown RBP5.83□□□□□ -1.48
TDP1-213ENST00000555880 PAX5Q02548 391 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 GUSBP1Q15486 140 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 SPINK9Q5DT21 86 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 PRAMEF5Q5TYX0 476 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 MBNL2Q5VZF2 373 aaKnown RBP5.83□□□□□ -1.48
TDP1-213ENST00000555880 KCNIP4Q6PIL6 250 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 FAM90A1Q86YD7 464 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 LURAP1LQ8IV03 231 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 ZNF383Q8NA42 475 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 ABHD5Q8WTS1 349 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 LRRC29Q8WV35 223 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 S100PBPQ96BU1 408 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 BTF3L4Q96K17 158 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 HEATR1Q9H583 2144 aaKnown RBP5.83□□□□□ -1.48
TDP1-213ENST00000555880 MSL2Q9HCI7 577 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 RAB9BQ9NP90 201 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 PARD6AQ9NPB6 346 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 KCNIP2Q9NS61 270 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 FZR1Q9UM11 496 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 TRAV17A0A0B4J275 112 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 IGHV2OR16-5A0A0B4J2B6 119 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 SPAARA0A1B0GVQ0 90 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 A0A1W2PPV4 95 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 ZNF729A6NN14 1252 aaPredicted RBP5.83□□□□□ -1.48
TDP1-213ENST00000555880 PMS2P5A8MQ11 134 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 PAGE4O60829 102 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 FCGR3BO75015 233 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 HPRT1P00492 218 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 IFNA10P01566 189 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 GYPAP02724 150 aa5.83□□□□□ -1.48
TDP1-213ENST00000555880 SRP14P37108 136 aaKnown RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms