RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 FAM103A1Q9BTL3 118 aaKnown RBP10.72□□□□□ -0.69
SHMT2-219ENST00000555563 MRPS7Q9Y2R9 242 aaKnown RBP10.72□□□□□ -0.69
SHMT2-219ENST00000555563 A0A1W2PN81 502 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 ARPC1BO15143 372 aaKnown RBP10.71□□□□□ -0.69
SHMT2-219ENST00000555563 SOX15O60248 233 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 IGLV1-40P01703 118 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 CRYGBP07316 175 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 ZNF182P17025 639 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-219ENST00000555563 PRSS3P35030 304 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 CHRNA7P36544 502 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 SSBP2P81877 361 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-219ENST00000555563 EIF4EBP1Q13541 118 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-219ENST00000555563 SPCS2Q15005 226 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 CDK10Q15131 360 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 DEFB136Q30KP8 78 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 OXLD1Q5BKU9 147 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 KPRPQ5T749 579 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-219ENST00000555563 ZNF562Q6V9R5 426 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 PPP1R27Q86WC6 154 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 SNX29P2Q8IUI4 249 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 CLVS1Q8IUQ0 354 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-219ENST00000555563 MRPL41Q8IXM3 137 aaKnown RBP10.71□□□□□ -0.69
SHMT2-219ENST00000555563 LINC00482Q8N8I6 264 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 MINDY2Q8NBR6 621 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 WFDC9Q8NEX5 89 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 GRPEL2Q8TAA5 225 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 SECTM1Q8WVN6 248 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 ARPC1AQ92747 370 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 DUX3Q96PT4 197 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 HSD17B10Q99714 261 aaKnown RBP10.71□□□□□ -0.69
SHMT2-219ENST00000555563 KLK15Q9H2R5 256 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 CCL28Q9NRJ3 127 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 TAS2R8Q9NYW2 309 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 EHFQ9NZC4 300 aa10.71□□□□□ -0.69
SHMT2-219ENST00000555563 TGP01266 2768 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 SMIM31A0A1B0GVY4 71 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 FAM25AB3EWG3 89 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 FAM25CB3EWG5 89 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 FAM25GB3EWG6 89 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 FCGR3BO75015 233 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 IGLL1P15814 213 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 NAT1P18440 290 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 CDX1P47902 265 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-219ENST00000555563 FXYD4P59646 89 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 GNB1P62873 340 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 PJVKQ0ZLH3 352 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 FXYD3Q14802 87 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 MZT2AQ6P582 158 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 UNQ5815/PRO19632Q6UWF5 114 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 IDO2Q6ZQW0 420 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 OSR1Q8TAX0 266 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-219ENST00000555563 GPX8Q8TED1 209 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 C4orf3Q8WVX3 66 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 TCTEX1D2Q8WW35 142 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 RAX2Q96IS3 184 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 GPHA2Q96T91 129 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 P2RX4Q99571 388 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 FOXA2Q9Y261 457 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-219ENST00000555563 PRELID3BQ9Y3B1 194 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 NUBP2Q9Y5Y2 271 aa10.7□□□□□ -0.7
SHMT2-219ENST00000555563 TNFSF12O43508 249 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 PMP2P02689 132 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 SAA1P0DJI8 122 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-219ENST00000555563 MYCNOSP40205 109 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 RFX2P48378 723 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 TAS2R46P59540 309 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 UBE2KP61086 200 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 MSMO1Q15800 293 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 MRGPRG-AS1Q2M3A8 158 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 VMA21Q3ZAQ7 101 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 TMEM65Q6PI78 240 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 ZNF66Q6ZN08 573 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 TMEM17Q86X19 198 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 TCTEX1D1Q8N7M0 179 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 LFNGQ8NES3 379 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 OR5H2Q8NGV7 314 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 CASTOR1Q8WTX7 329 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 RAB2BQ8WUD1 216 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 SLC5A7Q9GZV3 580 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 GNB4Q9HAV0 340 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 SCPEP1Q9HB40 452 aa10.69□□□□□ -0.7
SHMT2-219ENST00000555563 CCL24O00175 119 aa10.68□□□□□ -0.7
SHMT2-219ENST00000555563 CNIH1O95406 144 aa10.68□□□□□ -0.7
SHMT2-219ENST00000555563 HRH1P35367 487 aa10.68□□□□□ -0.7
SHMT2-219ENST00000555563 RPL5P46777 297 aaKnown RBP10.68□□□□□ -0.7
SHMT2-219ENST00000555563 RAB9AP51151 201 aa10.68□□□□□ -0.7
SHMT2-219ENST00000555563 TMBIM6P55061 237 aa10.68□□□□□ -0.7
SHMT2-219ENST00000555563 HERV-K104P61576 105 aa10.68□□□□□ -0.7
SHMT2-219ENST00000555563 TMEM267Q0VDI3 215 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-219ENST00000555563 DYRK1AQ13627 763 aa10.68□□□□□ -0.7
SHMT2-219ENST00000555563 KIAA0141Q14154 515 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-219ENST00000555563 ACTBL2Q562R1 376 aa10.68□□□□□ -0.7
SHMT2-219ENST00000555563 MFSD4AQ8N468 514 aa10.68□□□□□ -0.7
SHMT2-219ENST00000555563 OR4S2Q8NH73 311 aa10.68□□□□□ -0.7
SHMT2-219ENST00000555563 GIMAP1Q8WWP7 306 aa10.68□□□□□ -0.7
SHMT2-219ENST00000555563 RCC1LQ96I51 464 aaKnown RBP10.68□□□□□ -0.7
SHMT2-219ENST00000555563 DCUN1D5Q9BTE7 237 aa10.68□□□□□ -0.7
SHMT2-219ENST00000555563 EXTL2Q9UBQ6 330 aa10.68□□□□□ -0.7
SHMT2-219ENST00000555563 ADAM30Q9UKF2 790 aa10.68□□□□□ -0.7
SHMT2-219ENST00000555563 PRB2P02812 416 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms