RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 PRRX1P54821 245 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 MSMO1Q15800 293 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 ZNF66Q6ZN08 573 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 TGIF2LXQ8IUE1 241 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 SELENOHQ8IZQ5 122 aaKnown RBP8.69□□□□□ -1.02
TDP1-211ENST00000555178 VKORC1L1Q8N0U8 176 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.69□□□□□ -1.02
TDP1-211ENST00000555178 COQ8AQ8NI60 647 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 FAM216AQ8WUB2 273 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 SEC22AQ96IW7 307 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 ST6GAL2Q96JF0 529 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 DMRTB1Q96MA1 342 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 NABP2Q9BQ15 211 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 GAB2Q9UQC2 676 aa8.69□□□□□ -1.02
TDP1-211ENST00000555178 IGHV1-69DA0A0B4J2H0 117 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 A0A0U1RQK1 487 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 CCNKO75909 580 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 CDS2O95674 445 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 IGHV1-69P01742 117 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 SERPINE2P07093 398 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 LPAR6P43657 344 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 CATR1Q13166 79 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 AKAP14Q86UN6 197 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 OR10C1Q96KK4 312 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 TMEM56Q96MV1 263 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 TMEM56-RWDD3S4R434 201 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 HIVEP2P31629 2446 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 TET2Q6N021 2002 aaPredicted RBP8.68□□□□□ -1.02
TDP1-211ENST00000555178 C13orf42A0A1B0GVH6 325 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 H0YJW9 148 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 NPFFO15130 113 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 CRYZL1O95825 349 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 IGKV1-5P01602 117 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 CD99P14209 185 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 HTR1DP28221 377 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 G6PCP35575 357 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 UBE2E1P51965 193 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 SSX2Q16385 188 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 Q5BKY6 102 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 GGNBP1Q5YKI7 109 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 ZNF695Q8IW36 515 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 LGI3Q8N145 548 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 OR5M8Q8NGP6 311 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 RPEQ96AT9 228 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 RITA1Q96K30 269 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 TNCP24821 2201 aa8.68□□□□□ -1.02
TDP1-211ENST00000555178 IGHV1-3A0A0C4DH29 117 aa8.67□□□□□ -1.02
TDP1-211ENST00000555178 A0A1W2PPI3 338 aa8.67□□□□□ -1.02
TDP1-211ENST00000555178 RNF212BA8MTL3 300 aa8.67□□□□□ -1.02
TDP1-211ENST00000555178 KRASP01116 189 aa8.67□□□□□ -1.02
TDP1-211ENST00000555178 THBS3P49746 956 aa8.67□□□□□ -1.02
TDP1-211ENST00000555178 FAM120AOSQ5T036 256 aa8.67□□□□□ -1.02
TDP1-211ENST00000555178 TPTE2P1Q5T6R2 138 aa8.67□□□□□ -1.02
TDP1-211ENST00000555178 LRTM2Q8N967 370 aa8.67□□□□□ -1.02
TDP1-211ENST00000555178 RBPMSQ93062 196 aaKnown RBP8.67□□□□□ -1.02
TDP1-211ENST00000555178 ZNF436Q9C0F3 470 aaPredicted RBP8.67□□□□□ -1.02
TDP1-211ENST00000555178 A0A0B4J2A0 478 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 BOLA2-SMG1P6H3BVE0 249 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 TIMM23O14925 209 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 NXPH3O95157 252 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 EPHA1P21709 976 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 IL3RAP26951 378 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 SSX9Q7RTT3 188 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 SLC35D1Q9NTN3 355 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 DPM3Q9P2X0 92 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 SHPKQ9UHJ6 478 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 AMMECR1Q9Y4X0 333 aaPredicted RBP8.66□□□□□ -1.02
TDP1-211ENST00000555178 C5orf51A6NDU8 294 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 H7C2Y5 167 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 TRAPPC2P0DI81 140 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 TRAPPC2BP0DI82 140 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 GATA3P23771 443 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 TAGLNQ01995 201 aaKnown RBP8.66□□□□□ -1.02
TDP1-211ENST00000555178 Q6ZRM9 215 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 MOB3BQ86TA1 216 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 OR5AN1Q8NGI8 311 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 ZNF48Q96MX3 618 aaPredicted RBP8.66□□□□□ -1.02
TDP1-211ENST00000555178 RAB18Q9NP72 206 aa8.66□□□□□ -1.02
TDP1-211ENST00000555178 SRRM4A7MD48 611 aaKnown RBP8.65□□□□□ -1.02
TDP1-211ENST00000555178 LEUTXA8MZ59 168 aa8.65□□□□□ -1.02
TDP1-211ENST00000555178 G3V3Q6 166 aa8.65□□□□□ -1.02
TDP1-211ENST00000555178 J3QLI3 93 aa8.65□□□□□ -1.02
TDP1-211ENST00000555178 AKR1C2P52895 323 aa8.65□□□□□ -1.02
TDP1-211ENST00000555178 LGALS4P56470 323 aa8.65□□□□□ -1.02
TDP1-211ENST00000555178 LRRC37A5PQ49AS3 106 aa8.65□□□□□ -1.02
TDP1-211ENST00000555178 NMSQ5H8A3 153 aa8.65□□□□□ -1.02
TDP1-211ENST00000555178 GPR157Q5UAW9 335 aa8.65□□□□□ -1.02
TDP1-211ENST00000555178 FAM71F2Q6NXP2 309 aa8.65□□□□□ -1.02
TDP1-211ENST00000555178 PDCD10Q9BUL8 212 aa8.65□□□□□ -1.02
TDP1-211ENST00000555178 PRELID3BQ9Y3B1 194 aa8.65□□□□□ -1.02
TDP1-211ENST00000555178 MARCH11A6NNE9 402 aa8.65□□□□□ -1.03
TDP1-211ENST00000555178 GAPDHP04406 335 aaKnown RBP8.65□□□□□ -1.03
TDP1-211ENST00000555178 CNTFRP26992 372 aa8.65□□□□□ -1.03
TDP1-211ENST00000555178 IAH1Q2TAA2 248 aaPredicted RBP8.65□□□□□ -1.03
TDP1-211ENST00000555178 CLEC9AQ6UXN8 241 aa8.65□□□□□ -1.03
TDP1-211ENST00000555178 OR4S2Q8NH73 311 aa8.65□□□□□ -1.03
TDP1-211ENST00000555178 CFHR4Q92496 578 aa8.65□□□□□ -1.03
TDP1-211ENST00000555178 GPR146Q96CH1 333 aa8.65□□□□□ -1.03
TDP1-211ENST00000555178 R3HDM4Q96D70 268 aa8.65□□□□□ -1.03
TDP1-211ENST00000555178 GSKIPQ9P0R6 139 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms