RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 OR10G8Q8NGN5 311 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 PMCHL2Q9BQD1 86 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 GNB4Q9HAV0 340 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 ELOVL5Q9NYP7 299 aa7.49□□□□□ -1.21
SYNE2-217ENST00000555022 TECRQ9NZ01 308 aaKnown RBP7.49□□□□□ -1.21
SYNE2-217ENST00000555022 OR6C6A6NF89 314 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 LMO7DNF2Z398 122 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 RRHO14718 337 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 WNT9BO14905 357 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 GGCTO75223 188 aaKnown RBP7.48□□□□□ -1.21
SYNE2-217ENST00000555022 CBR3O75828 277 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 IGHV3-48P01763 117 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 IL6RP08887 468 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-217ENST00000555022 WNT2P09544 360 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 OR10J4P0C629 311 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 MYOD1P15172 320 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 TIMP3P35625 211 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 BPIFB3P59826 476 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 RPL15P61313 204 aaKnown RBP7.48□□□□□ -1.21
SYNE2-217ENST00000555022 OR10D3Q8NH80 312 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 NPCDR1Q9BY65 106 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 TWSG1Q9GZX9 223 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 ASCL3Q9NQ33 180 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 C19orf25Q9UFG5 118 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-217ENST00000555022 RPH3ALQ9UNE2 315 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 TRIOBPQ9H2D6 2365 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 IGHV1OR15-9A0A0B4J2B8 117 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 ODAMA1E959 279 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 NDUFB8O95169 186 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 ZNF324BQ6AW86 544 aaPredicted RBP7.48□□□□□ -1.21
SYNE2-217ENST00000555022 MRGPRDQ8TDS7 321 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 SLC35E1Q96K37 410 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 LRFN3Q9BTN0 628 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 TMEM242Q9NWH2 141 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 DLL3Q9NYJ7 618 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 PXMP4Q9Y6I8 212 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 ATG2AQ2TAZ0 1938 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 TRAV1-1A0A0B4J248 108 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 ZNF253O75346 499 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 UMODP07911 640 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 SRIP30626 198 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 OR5A2Q8NGI9 324 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 LEAP2Q969E1 77 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 TMEM54Q969K7 222 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 P2RX4Q99571 388 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 CLEC1BQ9P126 229 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 RARRES3Q9UL19 164 aa7.48□□□□□ -1.21
SYNE2-217ENST00000555022 A0A1W2PN81 502 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 CDIPTO14735 213 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 TNFSF13O75888 250 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 PIAS2O75928 621 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 CELA3AP09093 270 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 GDF1P27539 372 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 SUMO3P55854 103 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-217ENST00000555022 CLDN15P56746 228 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 MRPS21P82921 87 aaKnown RBP7.47□□□□□ -1.21
SYNE2-217ENST00000555022 AESQ08117 197 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 PSG7Q13046 419 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 COTL1Q14019 142 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 KCNMB1Q16558 191 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 ALKBH6Q3KRA9 238 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 PDLIM3Q53GG5 364 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-217ENST00000555022 TGIF2LYQ8IUE0 185 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 ABHD12Q8N2K0 398 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 OR4C5Q8NGB2 326 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 PYGO2Q9BRQ0 406 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 SSBP4Q9BWG4 385 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-217ENST00000555022 ZNF586Q9NXT0 402 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 NPIPB13A6NJU9 1138 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 C2CD4DB7Z1M9 353 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 NPIPB4C9JG80 1138 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 IGFBP4P22692 258 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 CAMPP49913 170 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 SOX8P57073 446 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 SP5Q6BEB4 398 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-217ENST00000555022 RHBDD2Q6NTF9 364 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 RTL10Q7L3V2 364 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 FAM58AQ8N1B3 248 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 HES7Q9BYE0 225 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 NRN1Q9NPD7 142 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 HEYLQ9NQ87 328 aaPredicted RBP7.47□□□□□ -1.21
SYNE2-217ENST00000555022 YTHDF2Q9Y5A9 579 aaKnown RBP7.47□□□□□ -1.21
SYNE2-217ENST00000555022 PKDREJQ9NTG1 2253 aa7.47□□□□□ -1.21
SYNE2-217ENST00000555022 NXPH2O95156 264 aa7.46□□□□□ -1.21
SYNE2-217ENST00000555022 GABRA2P47869 451 aa7.46□□□□□ -1.21
SYNE2-217ENST00000555022 CCL7P80098 99 aa7.46□□□□□ -1.21
SYNE2-217ENST00000555022 SERF2P84101 59 aa7.46□□□□□ -1.21
SYNE2-217ENST00000555022 FAM216AQ8WUB2 273 aa7.46□□□□□ -1.21
SYNE2-217ENST00000555022 ANAPC16Q96DE5 110 aa7.46□□□□□ -1.21
SYNE2-217ENST00000555022 AGMATQ9BSE5 352 aa7.46□□□□□ -1.21
SYNE2-217ENST00000555022 TMEM147Q9BVK8 224 aa7.46□□□□□ -1.21
SYNE2-217ENST00000555022 QTRT1Q9BXR0 403 aaKnown RBP7.46□□□□□ -1.21
SYNE2-217ENST00000555022 CLEC5AQ9NY25 188 aa7.46□□□□□ -1.21
SYNE2-217ENST00000555022 PSG11Q9UQ72 335 aa7.46□□□□□ -1.21
SYNE2-217ENST00000555022 CCL4P13236 92 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 LIFP15018 202 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 SSTR5P35346 364 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 FGF12P61328 243 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 RPL31P62899 125 aaKnown RBP7.46□□□□□ -1.22
SYNE2-217ENST00000555022 C10orf128Q5T292 105 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms