RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 JMJD8Q96S16 334 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 SLC35D1Q9NTN3 355 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 TCF19Q9Y242 345 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 KCNIP3Q9Y2W7 256 aa8.17□□□□□ -1.1
SYNE2-215ENST00000554997 TEX13DA0A0J9YY54 714 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-215ENST00000554997 BTBD17A6NE02 478 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 CRYM-AS1A6NIL9 109 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 FCGR3BO75015 233 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 HPRT1P00492 218 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 IGKV1-16P04430 117 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 RLN1P04808 185 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 MECP2P51608 486 aaKnown RBP8.16□□□□□ -1.1
SYNE2-215ENST00000554997 UBE2MP61081 183 aaKnown RBP8.16□□□□□ -1.1
SYNE2-215ENST00000554997 CBX3Q13185 183 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 HES1Q14469 280 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 ZNF585BQ52M93 769 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 TMEM177Q53S58 311 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 DHRS7BQ6IAN0 325 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-215ENST00000554997 C11orf88Q6PI97 169 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 LIAT1Q6ZQX7 453 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 TMED4Q7Z7H5 227 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 NAV3Q8IVL0 2385 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 SGPP2Q8IWX5 399 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 CENPSQ8N2Z9 138 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 Q8N6K4 173 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 OR51H1Q8NH63 302 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 OSR1Q8TAX0 266 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-215ENST00000554997 ENKURQ8TC29 256 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 TMEM230Q96A57 120 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 RBM14Q96PK6 669 aaKnown RBP8.16□□□□□ -1.1
SYNE2-215ENST00000554997 AIFM2Q9BRQ8 373 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 NAA60Q9H7X0 242 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 PLSCR3Q9NRY6 295 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 FLVCR2Q9UPI3 526 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 NUBP2Q9Y5Y2 271 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 MXRA5Q9NR99 2828 aa8.16□□□□□ -1.1
SYNE2-215ENST00000554997 H0Y980 276 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 ARPC1BO15143 372 aaKnown RBP8.15□□□□□ -1.1
SYNE2-215ENST00000554997 TCF21O43680 179 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 RAMP3O60896 148 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 OR2F2O95006 317 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 PTTG1O95997 202 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 IFNA2P01563 188 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 H2AFB2P0C5Z0 115 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 TMEM11P17152 192 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 LPAR6P43657 344 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 TAS2R31P59538 309 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 RPS16P62249 146 aaKnown RBP8.15□□□□□ -1.1
SYNE2-215ENST00000554997 HNF4GQ14541 408 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 LY6EQ16553 131 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 PLET1Q6UQ28 207 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 C16orf82Q7Z2V1 217 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 NPBQ8NG41 125 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 OR4S2Q8NH73 311 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 GLYATL2Q8WU03 294 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 GALNT14Q96FL9 552 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 TP53RKQ96S44 253 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 PLEKHA2Q9HB19 425 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 ESM1Q9NQ30 184 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 LIN7CQ9NUP9 197 aaKnown RBP8.15□□□□□ -1.1
SYNE2-215ENST00000554997 C1RLQ9NZP8 487 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 VPREB3Q9UKI3 123 aa8.15□□□□□ -1.1
SYNE2-215ENST00000554997 TRAV6A0A075B6T7 132 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 DNAJC9-AS1A6NH13 148 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 SRRM4A7MD48 611 aaKnown RBP8.14□□□□□ -1.11
SYNE2-215ENST00000554997 SHOXO15266 292 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 CDS2O95674 445 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 CRYZL1O95825 349 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 HRASP01112 189 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 SERPINE2P07093 398 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 OR4E1P0C645 316 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 VSIG10L2P0DP72 767 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 RPA2P15927 270 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 UCP1P25874 307 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 F2RL1P55085 397 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 RAG2P55895 527 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 SUPT4H1P63272 117 aaKnown RBP8.14□□□□□ -1.11
SYNE2-215ENST00000554997 RGS21Q2M5E4 152 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 SP6Q3SY56 376 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 FBLN7Q53RD9 439 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 OR2B11Q5JQS5 317 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 CADM3Q8N126 398 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 ZFAND2BQ8WV99 257 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 RBMXL1Q96E39 390 aaKnown RBP8.14□□□□□ -1.11
SYNE2-215ENST00000554997 TMEM56Q96MV1 263 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 TSNAXQ99598 290 aaKnown RBP8.14□□□□□ -1.11
SYNE2-215ENST00000554997 MARVELD1Q9BSK0 173 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 CHIAQ9BZP6 476 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 TMEM222Q9H0R3 208 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 C20orf85Q9H1P6 137 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 RAB18Q9NP72 206 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 TNFRSF19Q9NS68 423 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 NUDT15Q9NV35 164 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 TMEM56-RWDD3S4R434 201 aa8.14□□□□□ -1.11
SYNE2-215ENST00000554997 C9orf170A2RU37 121 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 NCBP2LA6PVI3 153 aaKnown RBP8.13□□□□□ -1.11
SYNE2-215ENST00000554997 INMT-MINDY4F8WBC2 141 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 M0QZK8 103 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 PEX14O75381 377 aa8.13□□□□□ -1.11
SYNE2-215ENST00000554997 NDUFA3O95167 84 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms