RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TMEM177Q53S58 311 aa13.16□□□□□ -0.3
SPTLC2-203ENST00000554901 C11orf88Q6PI97 169 aa13.16□□□□□ -0.3
SPTLC2-203ENST00000554901 TBC1D26Q86UD7 250 aa13.16□□□□□ -0.3
SPTLC2-203ENST00000554901 OR51H1Q8NH63 302 aa13.16□□□□□ -0.3
SPTLC2-203ENST00000554901 OSR1Q8TAX0 266 aaPredicted RBP13.16□□□□□ -0.3
SPTLC2-203ENST00000554901 C1RLQ9NZP8 487 aa13.16□□□□□ -0.3
SPTLC2-203ENST00000554901 JMJD1CQ15652 2540 aa13.15□□□□□ -0.3
SPTLC2-203ENST00000554901 FAM240BA0A1B0GVZ2 78 aa13.15□□□□□ -0.3
SPTLC2-203ENST00000554901 FCGR3BO75015 233 aa13.15□□□□□ -0.3
SPTLC2-203ENST00000554901 PI3P19957 117 aa13.15□□□□□ -0.3
SPTLC2-203ENST00000554901 TAS2R31P59538 309 aa13.15□□□□□ -0.3
SPTLC2-203ENST00000554901 UBA52P62987 128 aaKnown RBP13.15□□□□□ -0.3
SPTLC2-203ENST00000554901 DCTN2Q13561 401 aaKnown RBP13.15□□□□□ -0.3
SPTLC2-203ENST00000554901 SPAG16Q8N0X2 631 aa13.15□□□□□ -0.3
SPTLC2-203ENST00000554901 ZFAND2BQ8WV99 257 aa13.15□□□□□ -0.3
SPTLC2-203ENST00000554901 TSNAXQ99598 290 aaKnown RBP13.15□□□□□ -0.3
SPTLC2-203ENST00000554901 AIFM2Q9BRQ8 373 aa13.15□□□□□ -0.3
SPTLC2-203ENST00000554901 CHIAQ9BZP6 476 aa13.15□□□□□ -0.3
SPTLC2-203ENST00000554901 H0Y980 276 aa13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 TRIM77I1YAP6 450 aa13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 FGF16O43320 207 aa13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 SPDEFO95238 335 aa13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 IGKV1-16P04430 117 aa13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 TCRBP04435 133 aa13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 UBE2MP61081 183 aaKnown RBP13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 LY6EQ16553 131 aa13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 TMEM128Q5BJH2 165 aa13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 CCBE1Q6UXH8 406 aaPredicted RBP13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 CENPSQ8N2Z9 138 aa13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 DUSP18Q8NEJ0 188 aa13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 GPHA2Q96T91 129 aa13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 SLC25A33Q9BSK2 321 aa13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 PLEKHA2Q9HB19 425 aa13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 MOB4Q9Y3A3 225 aa13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 NF1P21359 2839 aa13.14□□□□□ -0.31
SPTLC2-203ENST00000554901 C3orf85A0A1B0GTC6 90 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 CRYM-AS1A6NIL9 109 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 GPR137BO60478 399 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 CRYZL1O95825 349 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 HPRT1P00492 218 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 RPA2P15927 270 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 BRWD1-AS2P59051 145 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 HNF4GQ14541 408 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 SGPP2Q8IWX5 399 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 NPBQ8NG41 125 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 ENKURQ8TC29 256 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 GALNT14Q96FL9 552 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 NAA60Q9H7X0 242 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 KCNIP3Q9Y2W7 256 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 TEX13DA0A0J9YY54 714 aaPredicted RBP13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 NDUFA3O95167 84 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 RPS16P62249 146 aaKnown RBP13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 SLC25A42Q86VD7 318 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 TMEM219Q86XT9 240 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 HARBI1Q96MB7 349 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 ALX4Q9H161 411 aaPredicted RBP13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 PLSCR3Q9NRY6 295 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 TNFRSF19Q9NS68 423 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 COMMD9Q9P000 198 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 NUBP2Q9Y5Y2 271 aa13.13□□□□□ -0.31
SPTLC2-203ENST00000554901 PIGBOS1A0A0B4J2F0 54 aa13.12□□□□□ -0.31
SPTLC2-203ENST00000554901 SHOXO15266 292 aa13.12□□□□□ -0.31
SPTLC2-203ENST00000554901 NBR2O15453 112 aa13.12□□□□□ -0.31
SPTLC2-203ENST00000554901 HRASP01112 189 aa13.12□□□□□ -0.31
SPTLC2-203ENST00000554901 DHODHQ02127 395 aa13.12□□□□□ -0.31
SPTLC2-203ENST00000554901 MMDQ15546 238 aa13.12□□□□□ -0.31
SPTLC2-203ENST00000554901 OR2B11Q5JQS5 317 aa13.12□□□□□ -0.31
SPTLC2-203ENST00000554901 TMED4Q7Z7H5 227 aa13.12□□□□□ -0.31
SPTLC2-203ENST00000554901 CADM3Q8N126 398 aa13.12□□□□□ -0.31
SPTLC2-203ENST00000554901 ADAD2Q8NCV1 583 aaKnown RBP13.12□□□□□ -0.31
SPTLC2-203ENST00000554901 TMEM230Q96A57 120 aa13.12□□□□□ -0.31
SPTLC2-203ENST00000554901 DUX5Q96PT3 197 aa13.12□□□□□ -0.31
SPTLC2-203ENST00000554901 C20orf85Q9H1P6 137 aa13.12□□□□□ -0.31
SPTLC2-203ENST00000554901 KIAA1456Q9P272 454 aa13.12□□□□□ -0.31
SPTLC2-203ENST00000554901 CHST1O43916 411 aa13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 RAMP3O60896 148 aa13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 PTTG1O95997 202 aa13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 SERPINE2P07093 398 aa13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 ANXA3P12429 323 aa13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 AKR1C4P17516 323 aa13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 UCP1P25874 307 aa13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 MECP2P51608 486 aaKnown RBP13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 POU2AF1Q16633 256 aa13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 ZNF585BQ52M93 769 aa13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 FBLN7Q53RD9 439 aa13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 NRARPQ7Z6K4 114 aa13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 FAM71E2Q8N5Q1 922 aa13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 NPFFR1Q9GZQ6 430 aa13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 TMEM222Q9H0R3 208 aa13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 RANBP3Q9H6Z4 567 aaPredicted RBP13.11□□□□□ -0.31
SPTLC2-203ENST00000554901 NCBP2LA6PVI3 153 aaKnown RBP13.1□□□□□ -0.31
SPTLC2-203ENST00000554901 RRHO14718 337 aa13.1□□□□□ -0.31
SPTLC2-203ENST00000554901 ARPC1BO15143 372 aaKnown RBP13.1□□□□□ -0.31
SPTLC2-203ENST00000554901 NQO2P16083 231 aa13.1□□□□□ -0.31
SPTLC2-203ENST00000554901 F2RL1P55085 397 aa13.1□□□□□ -0.31
SPTLC2-203ENST00000554901 RAG2P55895 527 aa13.1□□□□□ -0.31
SPTLC2-203ENST00000554901 UBE2KP61086 200 aa13.1□□□□□ -0.31
SPTLC2-203ENST00000554901 VMA21Q3ZAQ7 101 aa13.1□□□□□ -0.31
SPTLC2-203ENST00000554901 C5orf56Q8N8D9 126 aa13.1□□□□□ -0.31
SPTLC2-203ENST00000554901 VSTM2AQ8TAG5 236 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms