RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 CCL1P22362 96 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 TAS2R30P59541 319 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 MYL6P60660 151 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 PRDX4Q13162 271 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 C1orf194Q5T5A4 169 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 OGFRL1Q5TC84 451 aaPredicted RBP1.34□□□□□ -2.19
SCFD1-213ENST00000554776 C8orf74Q6P047 294 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 SBSNQ6UWP8 590 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 GLT6D1Q7Z4J2 308 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 GID4Q8IVV7 300 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 UMODL1-AS1Q8N2C9 162 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 OR4X1Q8NH49 305 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 PTH2Q96A98 100 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 CPNE2Q96FN4 548 aaPredicted RBP1.34□□□□□ -2.19
SCFD1-213ENST00000554776 NKX6-2Q9C056 277 aaPredicted RBP1.34□□□□□ -2.19
SCFD1-213ENST00000554776 PARVGQ9HBI0 331 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 ANAPC10Q9UM13 185 aa1.34□□□□□ -2.19
SCFD1-213ENST00000554776 MYO9BQ13459 2157 aa1.34□□□□□ -2.2
SCFD1-213ENST00000554776 ADCY9O60503 1353 aa1.34□□□□□ -2.2
SCFD1-213ENST00000554776 ADAMTS7Q9UKP4 1686 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 FBN1P35555 2871 aaKnown RBP1.33□□□□□ -2.2
SCFD1-213ENST00000554776 GRIFINA4D1Z8 144 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 H3BPC8 53 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 COX7A2LO14548 114 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 GNRH2O43555 120 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 IFNA5P01569 189 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 CALB1P05937 261 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 BPGMP07738 259 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 KRT7P08729 469 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 CCR7P32248 378 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 GABRA2P47869 451 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 PSMD8P48556 350 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 AP2S1P53680 142 aaPredicted RBP1.33□□□□□ -2.2
SCFD1-213ENST00000554776 GNA12Q03113 381 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 LGALS9BQ3B8N2 356 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 CLVS2Q5SYC1 327 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 PTRHD1Q6GMV3 140 aaKnown RBP1.33□□□□□ -2.2
SCFD1-213ENST00000554776 CD200R1LQ6Q8B3 271 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 TCF24Q7RTU0 167 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 GPHB5Q86YW7 130 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 C10orf67Q8IYJ2 551 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 SLC35F6Q8N357 371 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 RNF133Q8WVZ7 376 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 DIRAS2Q96HU8 199 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 SLC35G5Q96KT7 338 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 C3orf18Q9UK00 162 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 PXMP4Q9Y6I8 212 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 ADGRB3O60242 1522 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 SLIT2O94813 1529 aa1.33□□□□□ -2.2
SCFD1-213ENST00000554776 SLX4Q8IY92 1834 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 TGIF2-C20orf24A0A0A6YYL0 155 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 IGHV3-15A0A0B4J1V0 119 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 TMEM269A0A1B0GVZ9 245 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 A0A1W2PQL4 384 aaPredicted RBP1.32□□□□□ -2.2
SCFD1-213ENST00000554776 TXNDC9O14530 226 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 LYPLA2O95372 231 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 TNNC2P02585 160 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 ZNF728P0DKX0 622 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 DDTP30046 118 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 RPL27AP46776 148 aaKnown RBP1.32□□□□□ -2.2
SCFD1-213ENST00000554776 XCL1P47992 114 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 HINT1P49773 126 aaPredicted RBP1.32□□□□□ -2.2
SCFD1-213ENST00000554776 ZNF140P52738 457 aaPredicted RBP1.32□□□□□ -2.2
SCFD1-213ENST00000554776 NKX2-5P52952 324 aaPredicted RBP1.32□□□□□ -2.2
SCFD1-213ENST00000554776 NAA20P61599 178 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 TBPL1P62380 186 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 UAP1Q16222 522 aaPredicted RBP1.32□□□□□ -2.2
SCFD1-213ENST00000554776 LRRC75BQ2VPJ9 315 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.32□□□□□ -2.2
SCFD1-213ENST00000554776 FAM78BQ5VT40 261 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 AGTRAPQ6RW13 159 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 GPR32P1Q8NGA4 272 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 OR4X2Q8NGF9 303 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 OR13C8Q8NGS7 320 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 CLDND2Q8NHS1 167 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 GNPNAT1Q96EK6 184 aaPredicted RBP1.32□□□□□ -2.2
SCFD1-213ENST00000554776 CCL13Q99616 98 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 GUCA1BQ9UMX6 200 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 WDR90Q96KV7 1748 aa1.32□□□□□ -2.2
SCFD1-213ENST00000554776 BAHCC1Q9P281 2608 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 A0A087WUU8 490 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 MUC21A0A0G2JKD1 596 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 A0A0G2JQZ4 141 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 MUC21A0A140T8X8 626 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 A0A1W2PQD3 144 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 TMEM235A6NFC5 223 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 RFPL4AA6NLU0 287 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 KNCNA6PVL3 124 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 C9JCJ5 164 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 RFPL4AL1F8VTS6 287 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 APOMO95445 188 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 ISG15P05161 165 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 DEFA4P12838 97 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 CCR2P41597 374 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 PLPPR5Q32ZL2 321 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 ACSM3Q53FZ2 586 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 SFXN4Q6P4A7 337 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 ZNF767PQ75MW2 155 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 OR51T1Q8NGJ9 327 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms