RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 HCP5Q6MZN7 132 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 BEND2Q8NDZ0 799 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 OR10J5Q8NHC4 309 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 SCARB1Q8WTV0 552 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 GLYATL2Q8WU03 294 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 SLC5A7Q9GZV3 580 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 KIF25Q9UIL4 384 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 OR2W1Q9Y3N9 320 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 RNF114Q9Y508 228 aa10.08□□□□□ -0.8
SHMT2-214ENST00000554604 C3orf85A0A1B0GTC6 90 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 DUXBA0A1W2PPF3 345 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 TMEM30CPA0ZSE6 113 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 MPTX1A8MV57 137 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 H0YIZ8 118 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 H3BUX3 64 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 RCC1P18754 421 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-214ENST00000554604 NUP62P37198 522 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-214ENST00000554604 MEF2CQ06413 473 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-214ENST00000554604 IAH1Q2TAA2 248 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-214ENST00000554604 C11orf42Q8N5U0 333 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 PPP1R35Q8TAP8 253 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 SECTM1Q8WVN6 248 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 C17orf50Q8WW18 174 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 WFDC12Q8WWY7 111 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 DCUN1D4Q92564 292 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 KIRREL1Q96J84 757 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 SSX3Q99909 188 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 ZFP57Q9NU63 452 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 TRAPPC2LQ9UL33 140 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 TMED3Q9Y3Q3 217 aa10.07□□□□□ -0.8
SHMT2-214ENST00000554604 IGKV1D-13A0A0B4J2D9 117 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 PIGBOS1A0A0B4J2F0 54 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 hADV38S2A0JD32 116 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 ANKRD34BA5PLL1 514 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 C17orf98A8MV24 154 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 RBP4P02753 201 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 IGKV1-13P0DP09 117 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 S100GP29377 79 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 AP2S1P53680 142 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-214ENST00000554604 PAX5Q02548 391 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 RAB32Q13637 225 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 ATXN7L3Q14CW9 347 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-214ENST00000554604 LRRC75BQ2VPJ9 315 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 SP6Q3SY56 376 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 PRR31Q5SQ13 230 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 C5orf24Q7Z6I8 188 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 TBC1D26Q86UD7 250 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 CMTM1Q8IZ96 169 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 OR13D1Q8NGV5 346 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 ST8SIA2Q92186 375 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 PHYHIPLQ96FC7 376 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 TMEM56Q96MV1 263 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 ZNF714Q96N38 554 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 AQP10Q96PS8 301 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 ARPC5LQ9BPX5 153 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 TMEM222Q9H0R3 208 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 TMEM56-RWDD3S4R434 201 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 TRRAPQ9Y4A5 3859 aa10.06□□□□□ -0.8
SHMT2-214ENST00000554604 MGST3O14880 152 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 PSPNO60542 156 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 ARG1P05089 322 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 IGHV1-8P0DP01 117 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 UCP1P25874 307 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 DLX6P56179 175 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 LY6EQ16553 131 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 ZNF818PQ6ZRF7 136 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 Q6ZSV7 163 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 TPRX1Q8N7U7 411 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 BVESQ8NE79 360 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 OR10V1Q8NGI7 309 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 OR1S1Q8NH92 325 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 LINC01006Q8NI28 216 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 IL22RA2Q969J5 263 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 AKR1E2Q96JD6 320 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 TP53RKQ96S44 253 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 TOLLIPQ9H0E2 274 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 MEGF9Q9H1U4 602 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 CCL28Q9NRJ3 127 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 MED9Q9NWA0 146 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 KCNIP1Q9NZI2 227 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 OR5AC2Q9NZP5 309 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 GSKIPQ9P0R6 139 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 UBE2J1Q9Y385 318 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-214ENST00000554604 LINC00312Q9Y6C7 94 aa10.05□□□□□ -0.8
SHMT2-214ENST00000554604 VWFP04275 2813 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 LEUTXA8MZ59 168 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 H0Y980 276 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 DEDDO75618 318 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 CDS2O95674 445 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 RLN2P04090 185 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 PAX6P26367 422 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 OR3A1P47881 315 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 LUMP51884 338 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-214ENST00000554604 SMCO1Q147U7 214 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 AANATQ16613 207 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 C6orf183Q5T699 404 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 TRAT1Q6PIZ9 186 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 LYZL2Q7Z4W2 148 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 LHFPL5Q8TAF8 219 aa10.04□□□□□ -0.8
SHMT2-214ENST00000554604 STOML3Q8TAV4 291 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms