RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 PRORSD1PA6NEY8 169 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 KPNA4O00629 521 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-211ENST00000554437 GPR75O95800 540 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 CCNE2O96020 404 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 IGLV3-27P01718 113 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 C1QBP02746 253 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 OPN1SWP03999 348 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 C1GALT1C1LP0DN25 315 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 CDK2P24941 298 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 ERP29P30040 261 aaKnown RBP2.91□□□□□ -1.94
SCFD1-211ENST00000554437 CMC4P56277 68 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-211ENST00000554437 LINC00313P59037 77 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 DEFA1P59665 94 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 RPS20P60866 119 aaKnown RBP2.91□□□□□ -1.94
SCFD1-211ENST00000554437 GNG5P63218 68 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 LOXL1Q08397 574 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-211ENST00000554437 PLPPR5Q32ZL2 321 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 CCDC153Q494R4 210 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 TMEM128Q5BJH2 165 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 C9orf64Q5T6V5 341 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 TMEM78Q5T7P6 136 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 DCUN1D2Q6PH85 259 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 LRP11Q86VZ4 500 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 BAP18Q8IXM2 172 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 C11orf40Q8WZ69 217 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 LZICQ8WZA0 190 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 ROPN1LQ96C74 230 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 RMND5BQ96G75 393 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-211ENST00000554437 TSPAN32Q96QS1 320 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 PBDC1Q9BVG4 233 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 MS4A8Q9BY19 250 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 COMMD5Q9GZQ3 224 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 SH3BGRL3Q9H299 93 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 CXorf21Q9HAI6 301 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 PARVBQ9HBI1 364 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 SSR3Q9UNL2 185 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 RFNGQ9Y644 331 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 GPATCH8Q9UKJ3 1502 aaKnown RBP2.91□□□□□ -1.94
SCFD1-211ENST00000554437 NCOA3Q9Y6Q9 1424 aa2.91□□□□□ -1.94
SCFD1-211ENST00000554437 PIKFYVEQ9Y2I7 2098 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 EFCAB10A6NFE3 127 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-211ENST00000554437 FSTL3O95633 263 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 HLA-DQA1P01909 254 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 ZNF806P0C7X5 589 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 SPI1P17947 270 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 GTF2A1P52655 376 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-211ENST00000554437 TPI1P60174 286 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 GNA12Q03113 381 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 SURF2Q15527 256 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-211ENST00000554437 MMDQ15546 238 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 CCDC58Q4VC31 144 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 SAMD13Q5VXD3 122 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 PP632Q6XCG6 107 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 NTM-AS1Q6ZSK4 140 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 C1orf174Q8IYL3 243 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 UMODL1-AS1Q8N2C9 162 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 FAM24BQ8N5W8 94 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 OR52N1Q8NH53 320 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 OR5W2Q8NH69 310 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 GNPNAT1Q96EK6 184 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-211ENST00000554437 CCL13Q99616 98 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 TBL1YQ9BQ87 522 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 NDFIP1Q9BT67 221 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 ALX4Q9H161 411 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-211ENST00000554437 KCNIP2Q9NS61 270 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 ACER3Q9NUN7 267 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 TMEM38BQ9NVV0 291 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 MED29Q9NX70 200 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 GSKIPQ9P0R6 139 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 ENOPH1Q9UHY7 261 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 OR52A1Q9UKL2 312 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 COQ4Q9Y3A0 265 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 NUP160Q12769 1436 aa2.9□□□□□ -1.95
SCFD1-211ENST00000554437 ARAP3Q8WWN8 1544 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 CHD2O14647 1828 aaKnown RBP2.89□□□□□ -1.95
SCFD1-211ENST00000554437 hCG_1818297A0A087WSY0 165 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 TMEM223A0PJW6 202 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 A8MT66 165 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 H7C1C5 153 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 PIRO00625 290 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 ZNF207O43670 478 aaKnown RBP2.89□□□□□ -1.95
SCFD1-211ENST00000554437 GSTZ1O43708 216 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-211ENST00000554437 OR7C2O60412 319 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 NDUFC2O95298 119 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 C8GP07360 202 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 OR10J4P0C629 311 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 CPMP14384 443 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 CRABP2P29373 138 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 GLRXP35754 106 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 DAPP51397 102 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 NCALDP61601 193 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 LCN6P62502 163 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 PSPHP78330 225 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 TNFAIP6P98066 277 aaPredicted RBP2.89□□□□□ -1.95
SCFD1-211ENST00000554437 DEFA6Q01524 100 aa2.89□□□□□ -1.95
SCFD1-211ENST00000554437 SYCNQ0VAF6 134 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms