RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 SULT1C2O00338 296 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 MFNGO00587 321 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 HSPA12AO43301 675 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 PROP1O75360 226 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 BRI3O95415 125 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 SCTP09683 121 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 CD3GP09693 182 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 EGR2P11161 476 aaPredicted RBP5.11□□□□□ -1.59
SLIRP-203ENST00000554074 CD40LGP29965 261 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 CEACAM6P40199 344 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 TMEM50BP56557 158 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 TAGLNQ01995 201 aaKnown RBP5.11□□□□□ -1.59
SLIRP-203ENST00000554074 PLGLAQ15195 96 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 ECSCRQ19T08 205 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 ACTBL2Q562R1 376 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 HACD4Q5VWC8 232 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 ACSM6Q6P461 480 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 GLDNQ6ZMI3 551 aaPredicted RBP5.11□□□□□ -1.59
SLIRP-203ENST00000554074 PPP1R27Q86WC6 154 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 SAMD12Q8N8I0 201 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 OR4A4PQ8NGN8 299 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 SETD6Q8TBK2 473 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 DCUN1D4Q92564 292 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 FLYWCH2Q96CP2 140 aaKnown RBP5.11□□□□□ -1.59
SLIRP-203ENST00000554074 SLC25A38Q96DW6 304 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 ARHGAP5-AS1Q96IT6 56 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 TMEM68Q96MH6 324 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 CMSS1Q9BQ75 279 aaKnown RBP5.11□□□□□ -1.59
SLIRP-203ENST00000554074 HDHD3Q9BSH5 251 aaPredicted RBP5.11□□□□□ -1.59
SLIRP-203ENST00000554074 NXF2Q9GZY0 626 aaKnown RBP5.11□□□□□ -1.59
SLIRP-203ENST00000554074 PARP12Q9H0J9 701 aaKnown RBP5.11□□□□□ -1.59
SLIRP-203ENST00000554074 OR1A1Q9P1Q5 309 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 METTL1Q9UBP6 276 aaKnown RBP5.11□□□□□ -1.59
SLIRP-203ENST00000554074 ZNF221Q9UK13 617 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 FBXO7Q9Y3I1 522 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 SMAD5-AS1Q9Y6J3 95 aa5.11□□□□□ -1.59
SLIRP-203ENST00000554074 A0A0B4J203 849 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 IGKV1-6A0A0C4DH72 117 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 FCN1O00602 326 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 CA2P00918 260 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 APOA2P02652 100 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 IGKV1-16P04430 117 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 HSPB1P04792 205 aaKnown RBP5.1□□□□□ -1.59
SLIRP-203ENST00000554074 CTXN2P0C2S0 81 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 OR8U9P0C7N5 309 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 PTBP1P26599 531 aaKnown RBP eCLIP5.1□□□□□ -1.59
SLIRP-203ENST00000554074 TGFBR1P36897 503 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 TALDO1P37837 337 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 LGALS7P47929 136 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 MRPS10P82664 201 aaKnown RBP5.1□□□□□ -1.59
SLIRP-203ENST00000554074 SPCS2Q15005 226 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 PSG5Q15238 335 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 MOGAT2Q3SYC2 334 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 CDNFQ49AH0 187 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 PLAC9Q5JTB6 97 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 UNQ5815/PRO19632Q6UWF5 114 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 LINC00299Q6ZSB3 139 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 ZNF383Q8NA42 475 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 OR6Q1Q8NGQ2 317 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 ARPC1AQ92747 370 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 DLX4Q92988 240 aaPredicted RBP5.1□□□□□ -1.59
SLIRP-203ENST00000554074 RHOVQ96L33 236 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 OR5B12Q96R08 314 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 CABLES2Q9BTV7 478 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 SCPEP1Q9HB40 452 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 RDH8Q9NYR8 311 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 KCNK7Q9Y2U2 307 aa5.1□□□□□ -1.59
SLIRP-203ENST00000554074 TRAV18A0A075B6X5 111 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 IGHV4OR15-8A0A075B7B6 117 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 A0A087WW49 117 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 TRBV6-7A0A0A0MS04 114 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 A0A0G2JLM5 398 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 SMIM30A4D0T7 59 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 DPPA5A6NC42 116 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 C3orf84H3BNL1 204 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 M0R1X1 148 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 FABP7O15540 132 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 SAP30O75446 220 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 IGLV2-23P01705 113 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 TRGV3P03979 118 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 CRYGBP07316 175 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 FCGR3AP08637 254 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 RRASP10301 218 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 GNB3P16520 340 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 ZP3P21754 424 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 S100A5P33763 92 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 SLURP1P55000 103 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 TPPP2P59282 170 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 GNG2P59768 71 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 RPS16P62249 146 aaKnown RBP5.09□□□□□ -1.59
SLIRP-203ENST00000554074 SSBP1Q04837 148 aaKnown RBP5.09□□□□□ -1.59
SLIRP-203ENST00000554074 ARFRP1Q13795 201 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 FXYD3Q14802 87 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 TMEM69Q5SWH9 247 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 DRAXINQ8NBI3 349 aaPredicted RBP5.09□□□□□ -1.59
SLIRP-203ENST00000554074 LFNGQ8NES3 379 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 OR5H6Q8NGV6 325 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 OR10J5Q8NHC4 309 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 ABHD5Q8WTS1 349 aa5.09□□□□□ -1.59
SLIRP-203ENST00000554074 FAM103A1Q9BTL3 118 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms