RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 IGHV3OR16-10A0A075B7F0 116 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 A0A0U1RQK1 487 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 BTBD17A6NE02 478 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 SSNA1O43805 119 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 SPDEFO95238 335 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 FAM106CPP0CH98 169 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 NQO2P16083 231 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 AKR1C2P52895 323 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 RPL30P62888 115 aaKnown RBP11.7□□□□□ -0.54
SHMT2-210ENST00000553950 TMEM187Q14656 261 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 LRRC75BQ2VPJ9 315 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 OR2B11Q5JQS5 317 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 Q6ZNX1 250 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 THNSL2Q86YJ6 484 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 FAM219AQ8IW50 185 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 C12orf45Q8N5I9 185 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-210ENST00000553950 OR2T10Q8NGZ9 312 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 RNASE11Q8TAA1 199 aaKnown RBP11.7□□□□□ -0.54
SHMT2-210ENST00000553950 VSTM2AQ8TAG5 236 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 FLYWCH2Q96CP2 140 aaKnown RBP11.7□□□□□ -0.54
SHMT2-210ENST00000553950 HARBI1Q96MB7 349 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 TMEM56Q96MV1 263 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 TSNAXQ99598 290 aaKnown RBP11.7□□□□□ -0.54
SHMT2-210ENST00000553950 SEC22CQ9BRL7 303 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 OR51J1Q9H342 316 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 PITPNC1Q9UKF7 332 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 ALG5Q9Y673 324 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 TMEM56-RWDD3S4R434 201 aa11.7□□□□□ -0.54
SHMT2-210ENST00000553950 VENTXO95231 258 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 CDS2O95674 445 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 CRYZL1O95825 349 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 LY6G6DO95868 133 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 MOSP00540 346 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 IFNA21P01568 189 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 LGALS7P47929 136 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 DIAPH2-AS1Q14236 149 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 TMEM177Q53S58 311 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 LDLRAD2Q5SZI1 272 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 LIN54Q6MZP7 749 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 CADM3Q8N126 398 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 OR8H1Q8NGG4 311 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 OR5R1Q8NH85 324 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 GLYATL2Q8WU03 294 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 CFHR4Q92496 578 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 RRNAD1Q96FB5 475 aaKnown RBP11.69□□□□□ -0.54
SHMT2-210ENST00000553950 GPHA2Q96T91 129 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 SPIN2AQ99865 258 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 SPIN2BQ9BPZ2 258 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 RAB18Q9NP72 206 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 CACFD1Q9UGQ2 172 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 TMED3Q9Y3Q3 217 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 TLN2Q9Y4G6 2542 aa11.69□□□□□ -0.54
SHMT2-210ENST00000553950 ZNF469Q96JG9 3925 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-210ENST00000553950 MAP1AP78559 2803 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-210ENST00000553950 A0A0A6YYJ9 748 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 A0A0B4J293 547 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 SHOXO15266 292 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 VDAC1P21796 283 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 LPAR6P43657 344 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 POU2AF1Q16633 256 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 SP6Q3SY56 376 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 VMA21Q3ZAQ7 101 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 TMEM268Q5VZI3 342 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 C16orf82Q7Z2V1 217 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 OR52B4Q8NGK2 314 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 C1RLQ9NZP8 487 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 KIAA1456Q9P272 454 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 OTOGQ6ZRI0 2925 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 ACANP16112 2415 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 HIVEP2P31629 2446 aa11.68□□□□□ -0.54
SHMT2-210ENST00000553950 MARCH11A6NNE9 402 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 FAM90A9PA6NNJ1 464 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 RAMP3O60896 148 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 S1PR2O95136 353 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 IGKV1D-33P01593 117 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 IGKV1-33P01594 117 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 SNRNP70P08621 437 aaKnown RBP11.67□□□□□ -0.54
SHMT2-210ENST00000553950 FGF2P09038 288 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 TMEM11P17152 192 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 SRD5A1P18405 259 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 HES1Q14469 280 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 ANKRD55Q3KP44 614 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 ZNF585BQ52M93 769 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 THOC7Q6I9Y2 204 aaKnown RBP11.67□□□□□ -0.54
SHMT2-210ENST00000553950 RBMS3Q6XE24 437 aaKnown RBP11.67□□□□□ -0.54
SHMT2-210ENST00000553950 DMBX1Q8NFW5 382 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 ASB13Q8WXK3 278 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 LSM10Q969L4 123 aaKnown RBP11.67□□□□□ -0.54
SHMT2-210ENST00000553950 ZDHHC16Q969W1 377 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 R3HDM4Q96D70 268 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 AJUBAQ96IF1 538 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 MED28Q9H204 178 aa11.67□□□□□ -0.54
SHMT2-210ENST00000553950 IGHV3-72A0A0B4J1Y9 119 aa11.66□□□□□ -0.54
SHMT2-210ENST00000553950 IGKV1-16P04430 117 aa11.66□□□□□ -0.54
SHMT2-210ENST00000553950 TRAPPC2P0DI81 140 aa11.66□□□□□ -0.54
SHMT2-210ENST00000553950 TRAPPC2BP0DI82 140 aa11.66□□□□□ -0.54
SHMT2-210ENST00000553950 RRAS2P62070 204 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-210ENST00000553950 RPS16P62249 146 aaKnown RBP11.66□□□□□ -0.54
SHMT2-210ENST00000553950 EBI3Q14213 229 aa11.66□□□□□ -0.54
SHMT2-210ENST00000553950 SELENOHQ8IZQ5 122 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms