RNA–Protein interactions for RNA: ENST00000552045.1

LIMA1-210, Transcript of LIM domain and actin binding 1, humanhuman

TSL 2

Gene LIMA1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-210ENST00000552045 OPN1SWP03999 348 aa3.31□□□□□ -1.88
LIMA1-210ENST00000552045 HRES1P13985 223 aa3.31□□□□□ -1.88
LIMA1-210ENST00000552045 MYL12AP19105 171 aa3.31□□□□□ -1.88
LIMA1-210ENST00000552045 CRABP1P29762 137 aa3.31□□□□□ -1.88
LIMA1-210ENST00000552045 OPRM1P35372 400 aa3.31□□□□□ -1.88
LIMA1-210ENST00000552045 GNA13Q14344 377 aa3.31□□□□□ -1.88
LIMA1-210ENST00000552045 ACSM3Q53FZ2 586 aa3.31□□□□□ -1.88
LIMA1-210ENST00000552045 C1orf195Q5TG92 126 aa3.31□□□□□ -1.88
LIMA1-210ENST00000552045 SLC51BQ86UW2 128 aa3.31□□□□□ -1.88
LIMA1-210ENST00000552045 GPR32P1Q8NGA4 272 aa3.31□□□□□ -1.88
LIMA1-210ENST00000552045 MFSD8Q8NHS3 518 aa3.31□□□□□ -1.88
LIMA1-210ENST00000552045 OPTNQ96CV9 577 aa3.31□□□□□ -1.88
LIMA1-210ENST00000552045 SLC25A44Q96H78 314 aaPredicted RBP3.31□□□□□ -1.88
LIMA1-210ENST00000552045 ABCG5Q9H222 651 aa3.31□□□□□ -1.88
LIMA1-210ENST00000552045 HES4Q9HCC6 221 aa3.31□□□□□ -1.88
LIMA1-210ENST00000552045 CARHSP1Q9Y2V2 147 aaKnown RBP3.31□□□□□ -1.88
LIMA1-210ENST00000552045 ADGRL2O95490 1459 aa3.3□□□□□ -1.88
LIMA1-210ENST00000552045 EVC2Q86UK5 1308 aa3.3□□□□□ -1.88
LIMA1-210ENST00000552045 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.3□□□□□ -1.88
LIMA1-210ENST00000552045 D6RAR5 112 aa3.3□□□□□ -1.88
LIMA1-210ENST00000552045 RTL8CO15255 209 aa3.3□□□□□ -1.88
LIMA1-210ENST00000552045 CPSF4O95639 269 aaKnown RBP3.3□□□□□ -1.88
LIMA1-210ENST00000552045 REG1AP05451 166 aa3.3□□□□□ -1.88
LIMA1-210ENST00000552045 DDTP30046 118 aa3.3□□□□□ -1.88
LIMA1-210ENST00000552045 OR10J1P30954 320 aa3.3□□□□□ -1.88
LIMA1-210ENST00000552045 DAPP51397 102 aa3.3□□□□□ -1.88
LIMA1-210ENST00000552045 FGF12P61328 243 aa3.3□□□□□ -1.88
LIMA1-210ENST00000552045 JOSD1Q15040 202 aaPredicted RBP3.3□□□□□ -1.88
LIMA1-210ENST00000552045 ZNF141Q15928 474 aa3.3□□□□□ -1.88
LIMA1-210ENST00000552045 HS3ST5Q8IZT8 346 aa3.3□□□□□ -1.88
LIMA1-210ENST00000552045 Q8NAQ8 132 aa3.3□□□□□ -1.88
LIMA1-210ENST00000552045 ITFG2Q969R8 447 aa3.3□□□□□ -1.88
LIMA1-210ENST00000552045 PPP1R14BQ96C90 147 aa3.3□□□□□ -1.88
LIMA1-210ENST00000552045 PCYT1BQ9Y5K3 369 aaPredicted RBP3.3□□□□□ -1.88
LIMA1-210ENST00000552045 USP32Q8NFA0 1604 aa3.3□□□□□ -1.88
LIMA1-210ENST00000552045 CRB1P82279 1406 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 COL1A2P08123 1366 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 ZBED9Q6R2W3 1325 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 A0A1B0GU33 70 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 CDKN2CP42773 168 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 AKR1C2P52895 323 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 CEBPGP53567 150 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 RSU1Q15404 277 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 DEFB115Q30KQ5 88 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 KRTAP13-3Q3SY46 172 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 LYPD6Q86Y78 171 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 OR52B2Q96RD2 323 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 STACQ99469 402 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 XPNPEP1Q9NQW7 623 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 TAS2R9Q9NYW1 312 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 EMC3Q9P0I2 261 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 THSD7AQ9UPZ6 1657 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 KCPQ6ZWJ8 1503 aa3.29□□□□□ -1.88
LIMA1-210ENST00000552045 NID2Q14112 1375 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 DSCAML1Q8TD84 2053 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 EVPLLA8MZ36 301 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 M0R381 172 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 CD5P06127 495 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 CA7P43166 264 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 TCL1AP56279 114 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 CTBP2P56545 445 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 SNAP25P60880 206 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 DEFB134Q4QY38 66 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 OR10K2Q6IF99 312 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 WDR59Q6PJI9 974 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 SCXQ7RTU7 201 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 GID4Q8IVV7 300 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 OR8K1Q8NGG5 319 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 JOSD2Q8TAC2 188 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 OR5P3Q8WZ94 311 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 ANKRD36BP1Q96IX9 119 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 TBX5Q99593 518 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 C1QTNF6Q9BXI9 259 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 CACNA1DQ01668 2161 aa3.28□□□□□ -1.88
LIMA1-210ENST00000552045 OVOS2A0A0G2JMS6 1433 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 OVOS2A0A0J9YW53 1432 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 TROQ12816 1431 aaPredicted RBP3.27□□□□□ -1.89
LIMA1-210ENST00000552045 OVOS2Q6IE36 1432 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 RRBP1Q9P2E9 1410 aaKnown RBP3.27□□□□□ -1.89
LIMA1-210ENST00000552045 ADAMTS7Q9UKP4 1686 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 A8MWP6 167 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 GOLGA6L19H0YKK7 550 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 LYPLA2O95372 231 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 CD7P09564 240 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 RNASE2P10153 161 aaKnown RBP3.27□□□□□ -1.89
LIMA1-210ENST00000552045 HIST1H1EP10412 219 aaKnown RBP3.27□□□□□ -1.89
LIMA1-210ENST00000552045 CCR7P32248 378 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 REG1BP48304 166 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 NAA20P61599 178 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 MRPL51Q4U2R6 128 aaKnown RBP3.27□□□□□ -1.89
LIMA1-210ENST00000552045 OR1M1Q8NGA1 313 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 C16orf78Q8WTQ4 265 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 IGF2BP2-AS1Q96M15 143 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 TMEM109Q9BVC6 243 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 OR51I1Q9H343 314 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 TRPM2O94759 1503 aa3.27□□□□□ -1.89
LIMA1-210ENST00000552045 MTUS2Q5JR59 1369 aa3.26□□□□□ -1.89
LIMA1-210ENST00000552045 PTPN23Q9H3S7 1636 aa3.26□□□□□ -1.89
LIMA1-210ENST00000552045 INO80Q9ULG1 1556 aaPredicted RBP3.26□□□□□ -1.89
LIMA1-210ENST00000552045 IGSF23A1L1A6 192 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms