RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 RAB29O14966 203 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 OR2C1O95371 312 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 PRH1P02810 166 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 IGKV1-16P04430 117 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 FCGR2BP31994 310 aaPredicted RBP3.95□□□□□ -1.78
HOXB3-213ENST00000552000 MC5RP33032 325 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 SOX2P48431 317 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 TCTAP57738 103 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 LINC00205P59089 165 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 HTD2P86397 168 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 ATP5G2Q06055 141 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 ANKRD55Q3KP44 614 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 C12orf73Q69YU5 71 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 IGFL4Q6B9Z1 124 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 DMKNQ6E0U4 476 aaPredicted RBP3.95□□□□□ -1.78
HOXB3-213ENST00000552000 FAM71F2Q6NXP2 309 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 ZNF529Q6P280 563 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 GAPTQ8N292 157 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 MAPKAPK5-AS1Q8N8E1 139 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 DRAXINQ8NBI3 349 aaPredicted RBP3.95□□□□□ -1.78
HOXB3-213ENST00000552000 ADAD2Q8NCV1 583 aaKnown RBP3.95□□□□□ -1.78
HOXB3-213ENST00000552000 OR1L6Q8NGR2 347 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 DNAJC9Q8WXX5 260 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 THRSPQ92748 146 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 FAM46BQ96A09 425 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 CCDC124Q96CT7 223 aaKnown RBP3.95□□□□□ -1.78
HOXB3-213ENST00000552000 C4orf36Q96KX1 117 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 TMEM68Q96MH6 324 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 RNF5Q99942 180 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 FAM107BQ9H098 131 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 RIBC2Q9H4K1 309 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 SPACA1Q9HBV2 294 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 AKIP1Q9NQ31 210 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 PIPOXQ9P0Z9 390 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 MLXQ9UH92 298 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 UBQLN2Q9UHD9 624 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 ZNF230Q9UIE0 474 aaPredicted RBP3.95□□□□□ -1.78
HOXB3-213ENST00000552000 RABL2BQ9UNT1 228 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 PEX16Q9Y5Y5 336 aa3.95□□□□□ -1.78
HOXB3-213ENST00000552000 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.94□□□□□ -1.78
HOXB3-213ENST00000552000 KIR2DL5BA0A0G2JN68 375 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 KIR2DL5BA0A0G2JPC4 375 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 DAPL1A0PJW8 107 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 TMEM213A2RRL7 107 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 TMEM212A6NML5 194 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 DEFB4AO15263 64 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 SPDEFO95238 335 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 IGLV2-23P01705 113 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 OR9G9P0C7N8 305 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 GTF2F2P13984 249 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 CBLN1P23435 193 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 ZNF93P35789 620 aaPredicted RBP3.94□□□□□ -1.78
HOXB3-213ENST00000552000 MFAP2P55001 183 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 LY6G6FQ5SQ64 297 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 DDI2Q5TDH0 399 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 BTNL8Q6UX41 500 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 KIR2DL5AQ8N109 375 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 ZNF645Q8N7E2 425 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 UXS1Q8NBZ7 420 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 OR5AK2Q8NH90 309 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 KIR2DL5BQ8NHK3 375 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 MRPL30Q8TCC3 161 aaKnown RBP3.94□□□□□ -1.78
HOXB3-213ENST00000552000 IL1F10Q8WWZ1 152 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 GALMQ96C23 342 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 ORAI1Q96D31 301 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 NSL1Q96IY1 281 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 PHB2Q99623 299 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 ALG8Q9BVK2 526 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 C11orf54Q9H0W9 315 aaPredicted RBP3.94□□□□□ -1.78
HOXB3-213ENST00000552000 PAK1IP1Q9NWT1 392 aaPredicted RBP3.94□□□□□ -1.78
HOXB3-213ENST00000552000 PPP1R14DQ9NXH3 145 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 STEAP1Q9UHE8 339 aa3.94□□□□□ -1.78
HOXB3-213ENST00000552000 TRAV25A0A0B4J276 109 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 ZNF320A2RRD8 509 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 FAM223BA6NKX1 122 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 E9PI62 339 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 LGALS9O00182 355 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 MPPED1O15442 326 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 GGCTO75223 188 aaKnown RBP3.93□□□□□ -1.78
HOXB3-213ENST00000552000 ZNF780AO75290 641 aaPredicted RBP3.93□□□□□ -1.78
HOXB3-213ENST00000552000 FKBP6O75344 327 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 CA11O75493 328 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 SC5DO75845 299 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 OR2J3O76001 311 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 S1PR2O95136 353 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 IGHV3-23P01764 117 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 APOA2P02652 100 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 RPSAP08865 295 aaKnown RBP3.93□□□□□ -1.78
HOXB3-213ENST00000552000 T-ENOLP0DO92 83 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 FUT3P21217 361 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 BDKRB2P30411 391 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 POLR2IP36954 125 aaKnown RBP3.93□□□□□ -1.78
HOXB3-213ENST00000552000 TMED1Q13445 227 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 HMGN3Q15651 99 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 ZNF674Q2M3X9 581 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 ODF3L2Q3SX64 289 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 SLC25A30Q5SVS4 291 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 SIGIRRQ6IA17 410 aa3.93□□□□□ -1.78
HOXB3-213ENST00000552000 DGAT2L7PQ6IED9 249 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms