RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 CRTAPO75718 401 aaPredicted RBP10.49□□□□□ -0.73
VPS29-209ENST00000551655 C8orf88P0DMB2 117 aa10.49□□□□□ -0.73
VPS29-209ENST00000551655 CEACAM6P40199 344 aa10.49□□□□□ -0.73
VPS29-209ENST00000551655 MED21Q13503 144 aa10.49□□□□□ -0.73
VPS29-209ENST00000551655 PRSS8Q16651 343 aa10.49□□□□□ -0.73
VPS29-209ENST00000551655 KDM4DQ6B0I6 523 aa10.49□□□□□ -0.73
VPS29-209ENST00000551655 XAF1Q6GPH4 301 aa10.49□□□□□ -0.73
VPS29-209ENST00000551655 AQP12AQ8IXF9 295 aa10.49□□□□□ -0.73
VPS29-209ENST00000551655 ARHGAP24Q8N264 748 aa10.49□□□□□ -0.73
VPS29-209ENST00000551655 CIB1Q99828 191 aa10.49□□□□□ -0.73
VPS29-209ENST00000551655 FAAP24Q9BTP7 215 aa10.49□□□□□ -0.73
VPS29-209ENST00000551655 TRAV10A0A0B4J240 114 aa10.48□□□□□ -0.73
VPS29-209ENST00000551655 HMX3A6NHT5 357 aa10.48□□□□□ -0.73
VPS29-209ENST00000551655 CD2P06729 351 aa10.48□□□□□ -0.73
VPS29-209ENST00000551655 RBMY1A1P0DJD3 496 aaKnown RBP10.48□□□□□ -0.73
VPS29-209ENST00000551655 RBMY1CP0DJD4 496 aa10.48□□□□□ -0.73
VPS29-209ENST00000551655 GPR176Q14439 515 aa10.48□□□□□ -0.73
VPS29-209ENST00000551655 FAM209BQ5JX69 171 aa10.48□□□□□ -0.73
VPS29-209ENST00000551655 AWAT2Q6E213 333 aa10.48□□□□□ -0.73
VPS29-209ENST00000551655 OR4A47Q6IF82 309 aa10.48□□□□□ -0.73
VPS29-209ENST00000551655 ZNF767PQ75MW2 155 aa10.48□□□□□ -0.73
VPS29-209ENST00000551655 SPATA24Q86W54 205 aa10.48□□□□□ -0.73
VPS29-209ENST00000551655 GPR148Q8TDV2 347 aa10.48□□□□□ -0.73
VPS29-209ENST00000551655 LRRC42Q9Y546 428 aa10.48□□□□□ -0.73
VPS29-209ENST00000551655 TRAV8-7A0A075B6U6 113 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 TSPAN4O14817 238 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 SHOXO15266 292 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 GLAP06280 429 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 SCTP09683 121 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 P0DMU3 169 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 FAM231AP0DMU4 169 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 FAM231CP0DMU5 169 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 TNP2Q05952 138 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 SYS1Q8N2H4 156 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 TTC9CQ8N5M4 171 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 JAGN1Q8N5M9 183 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 Q8NAQ8 132 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 LGALS12Q96DT0 336 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 C5orf30Q96GV9 206 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 RNF126Q9BV68 326 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 C5orf66Q9H5L9 145 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 ZNF221Q9UK13 617 aa10.47□□□□□ -0.73
VPS29-209ENST00000551655 ITGB1BP1O14713 200 aa10.46□□□□□ -0.73
VPS29-209ENST00000551655 IGFBP3P17936 291 aaPredicted RBP10.46□□□□□ -0.73
VPS29-209ENST00000551655 CAPGP40121 348 aa10.46□□□□□ -0.73
VPS29-209ENST00000551655 MAP2K4P45985 399 aa10.46□□□□□ -0.73
VPS29-209ENST00000551655 Q6ZRM9 215 aa10.46□□□□□ -0.73
VPS29-209ENST00000551655 C6orf201Q7Z4U5 140 aa10.46□□□□□ -0.73
VPS29-209ENST00000551655 CEACAM19Q7Z692 300 aa10.46□□□□□ -0.73
VPS29-209ENST00000551655 NR2C2APQ86WQ0 139 aa10.46□□□□□ -0.73
VPS29-209ENST00000551655 ZNF430Q9H8G1 570 aaPredicted RBP10.46□□□□□ -0.73
VPS29-209ENST00000551655 CHMP1AQ9HD42 196 aaPredicted RBP10.46□□□□□ -0.73
VPS29-209ENST00000551655 MRPL27Q9P0M9 148 aaKnown RBP10.46□□□□□ -0.73
VPS29-209ENST00000551655 EXOGQ9Y2C4 368 aaKnown RBP10.46□□□□□ -0.73
VPS29-209ENST00000551655 IGHV4-28A0A0C4DH34 117 aa10.45□□□□□ -0.74
VPS29-209ENST00000551655 G3V2T6 193 aa10.45□□□□□ -0.74
VPS29-209ENST00000551655 CA1P00915 261 aaPredicted RBP10.45□□□□□ -0.74
VPS29-209ENST00000551655 AMBPP02760 352 aa10.45□□□□□ -0.74
VPS29-209ENST00000551655 RPA2P15927 270 aa10.45□□□□□ -0.74
VPS29-209ENST00000551655 GBX2P52951 348 aaPredicted RBP10.45□□□□□ -0.74
VPS29-209ENST00000551655 ZNF880Q6PDB4 577 aa10.45□□□□□ -0.74
VPS29-209ENST00000551655 SETD9Q8NE22 299 aa10.45□□□□□ -0.74
VPS29-209ENST00000551655 EDARADDQ8WWZ3 215 aa10.45□□□□□ -0.74
VPS29-209ENST00000551655 MARC2Q969Z3 335 aa10.45□□□□□ -0.74
VPS29-209ENST00000551655 FANCD2OSQ96PS1 177 aa10.45□□□□□ -0.74
VPS29-209ENST00000551655 HDHD3Q9BSH5 251 aaPredicted RBP10.45□□□□□ -0.74
VPS29-209ENST00000551655 HRH4Q9H3N8 390 aa10.45□□□□□ -0.74
VPS29-209ENST00000551655 FAT1Q14517 4588 aa10.45□□□□□ -0.74
VPS29-209ENST00000551655 MFSD2BA6NFX1 497 aa10.44□□□□□ -0.74
VPS29-209ENST00000551655 NAPSAO96009 420 aa10.44□□□□□ -0.74
VPS29-209ENST00000551655 ERVK13-1Q9NX77 482 aa10.44□□□□□ -0.74
VPS29-209ENST00000551655 RPL36Q9Y3U8 105 aaKnown RBP10.44□□□□□ -0.74
VPS29-209ENST00000551655 ELOA3CA0A087WX78 387 aaPredicted RBP10.43□□□□□ -0.74
VPS29-209ENST00000551655 IGKV1-6A0A0C4DH72 117 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 A0A1W2PPK0 400 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 TCRBV3S1A0A5B6 114 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 TEX22C9J3V5 150 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 CLEC3BP05452 202 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 CTSDP07339 412 aaPredicted RBP10.43□□□□□ -0.74
VPS29-209ENST00000551655 ZBTB25P24278 435 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 UBE2KP61086 200 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 SNRPGP62308 76 aaKnown RBP10.43□□□□□ -0.74
VPS29-209ENST00000551655 TMEM187Q14656 261 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 VMA21Q3ZAQ7 101 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 SOHLH1Q5JUK2 328 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 C1orf134Q5TEV5 83 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 OR10K2Q6IF99 312 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 TEX45Q8NA69 505 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 PTX4Q96A99 478 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 EEF1AKMT3Q96AZ1 226 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 SPIN2AQ99865 258 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 SPIN2BQ9BPZ2 258 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 THTPAQ9BU02 230 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 GABARAPL3Q9BY60 117 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 C6orf62Q9GZU0 229 aaPredicted RBP10.43□□□□□ -0.74
VPS29-209ENST00000551655 GABARAPL1Q9H0R8 117 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 CELA1Q9UNI1 258 aa10.43□□□□□ -0.74
VPS29-209ENST00000551655 IGHV3OR16-8A0A075B7F1 116 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 DEFB131BA0A096LNP1 70 aa10.42□□□□□ -0.74
VPS29-209ENST00000551655 OR4C46A6NHA9 309 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms