RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 BDKRB2P30411 391 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 SOX2P48431 317 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 PPP3R1P63098 170 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 MRPL28Q13084 256 aaKnown RBP8.8□□□□□ -1
PTCH1-222ENST00000551425 AHSA2Q719I0 299 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 LHFPL3Q86UP9 236 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 GPHB5Q86YW7 130 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 SYS1Q8N2H4 156 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 ZNF383Q8NA42 475 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 CYYR1Q96J86 154 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 OR14A2Q96R54 314 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 C11orf68Q9H3H3 251 aaKnown RBP8.8□□□□□ -1
PTCH1-222ENST00000551425 FKBP14Q9NWM8 211 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 ERVK13-1Q9NX77 482 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 ABRACLQ9P1F3 81 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 EXOSC1Q9Y3B2 195 aaKnown RBP8.8□□□□□ -1
PTCH1-222ENST00000551425 HSPG2P98160 4391 aa8.8□□□□□ -1
PTCH1-222ENST00000551425 A8MWP6 167 aa8.79□□□□□ -1
PTCH1-222ENST00000551425 IGLL5B9A064 214 aa8.79□□□□□ -1
PTCH1-222ENST00000551425 PPP5D1E7EU14 171 aa8.79□□□□□ -1
PTCH1-222ENST00000551425 E9PI62 339 aa8.79□□□□□ -1
PTCH1-222ENST00000551425 OR2C1O95371 312 aa8.79□□□□□ -1
PTCH1-222ENST00000551425 HLA-AP01891 365 aaKnown RBP8.79□□□□□ -1
PTCH1-222ENST00000551425 CDK1P06493 297 aa8.79□□□□□ -1
PTCH1-222ENST00000551425 CD2P06729 351 aa8.79□□□□□ -1
PTCH1-222ENST00000551425 SIGIRRQ6IA17 410 aa8.79□□□□□ -1
PTCH1-222ENST00000551425 TMPRSS11AQ6ZMR5 421 aa8.79□□□□□ -1
PTCH1-222ENST00000551425 ZNF575Q86XF7 245 aa8.79□□□□□ -1
PTCH1-222ENST00000551425 OR2C3Q8N628 320 aa8.79□□□□□ -1
PTCH1-222ENST00000551425 DRAXINQ8NBI3 349 aaPredicted RBP8.79□□□□□ -1
PTCH1-222ENST00000551425 UXS1Q8NBZ7 420 aa8.79□□□□□ -1
PTCH1-222ENST00000551425 OR1L6Q8NGR2 347 aa8.79□□□□□ -1
PTCH1-222ENST00000551425 IL1F10Q8WWZ1 152 aa8.79□□□□□ -1
PTCH1-222ENST00000551425 DUSP21Q9H596 190 aa8.79□□□□□ -1
PTCH1-222ENST00000551425 ISG20L2Q9H9L3 353 aaKnown RBP8.79□□□□□ -1
PTCH1-222ENST00000551425 RGS10O43665 173 aa8.78□□□□□ -1
PTCH1-222ENST00000551425 MRPS14O60783 128 aaKnown RBP8.78□□□□□ -1
PTCH1-222ENST00000551425 APOA2P02652 100 aa8.78□□□□□ -1
PTCH1-222ENST00000551425 APELAP0DMC3 54 aa8.78□□□□□ -1
PTCH1-222ENST00000551425 LINC00205P59089 165 aa8.78□□□□□ -1
PTCH1-222ENST00000551425 GABARAPL2P60520 117 aa8.78□□□□□ -1
PTCH1-222ENST00000551425 MRGPRG-AS1Q2M3A8 158 aa8.78□□□□□ -1
PTCH1-222ENST00000551425 SLC38A6Q8IZM9 456 aa8.78□□□□□ -1
PTCH1-222ENST00000551425 NECAP1Q8NC96 275 aa8.78□□□□□ -1
PTCH1-222ENST00000551425 GPR148Q8TDV2 347 aa8.78□□□□□ -1
PTCH1-222ENST00000551425 FAM46BQ96A09 425 aa8.78□□□□□ -1
PTCH1-222ENST00000551425 PHB2Q99623 299 aa8.78□□□□□ -1
PTCH1-222ENST00000551425 CCDC90BQ9GZT6 254 aa8.78□□□□□ -1
PTCH1-222ENST00000551425 MAP6D1Q9H9H5 199 aa8.78□□□□□ -1
PTCH1-222ENST00000551425 C11orf94C9JXX5 98 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 MYL12BO14950 172 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 PDCD6O75340 191 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 CDK2AP2O75956 126 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 PRH1P02810 166 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 LIMS3P0CW19 117 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 LIMS4P0CW20 117 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 FCGR2BP31994 310 aaPredicted RBP8.77□□□□□ -1.01
PTCH1-222ENST00000551425 ETV1P50549 477 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 GBX2P52951 348 aaPredicted RBP8.77□□□□□ -1.01
PTCH1-222ENST00000551425 MFAP2P55001 183 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 TMEM177Q53S58 311 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 GLIPR1L1Q6UWM5 242 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 BTNL8Q6UX41 500 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 PRSS48Q7RTY5 328 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 Q96M66 194 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 RARRES2Q99969 163 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 SELENOIQ9C0D9 397 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 C11orf54Q9H0W9 315 aaPredicted RBP8.77□□□□□ -1.01
PTCH1-222ENST00000551425 CLEC2DQ9UHP7 191 aa8.77□□□□□ -1.01
PTCH1-222ENST00000551425 TNFAIP8O95379 198 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 C8orf88P0DMB2 117 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 MGMTP16455 207 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 IGFBP3P17936 291 aaPredicted RBP8.76□□□□□ -1.01
PTCH1-222ENST00000551425 C15orf32Q32M92 178 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 KCTD21Q4G0X4 260 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 FAM106AQ4KMX7 169 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 GLT8D1Q68CQ7 371 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 OR4A47Q6IF82 309 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 RBPMS2Q6ZRY4 209 aaKnown RBP8.76□□□□□ -1.01
PTCH1-222ENST00000551425 NANOGP1Q8N7R0 232 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 MAPKAPK5-AS1Q8N8E1 139 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 EDARADDQ8WWZ3 215 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 MARC2Q969Z3 335 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 PTX4Q96A99 478 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 GALNT14Q96FL9 552 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 SPAG8Q99932 426 aaPredicted RBP8.76□□□□□ -1.01
PTCH1-222ENST00000551425 MND1Q9BWT6 205 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 BANF2Q9H503 90 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 SLC35D1Q9NTN3 355 aa8.76□□□□□ -1.01
PTCH1-222ENST00000551425 ZNF320A2RRD8 509 aa8.75□□□□□ -1.01
PTCH1-222ENST00000551425 MPPED1O15442 326 aa8.75□□□□□ -1.01
PTCH1-222ENST00000551425 RPL35AP18077 110 aaKnown RBP8.75□□□□□ -1.01
PTCH1-222ENST00000551425 WNT4P56705 351 aa8.75□□□□□ -1.01
PTCH1-222ENST00000551425 IRF3Q14653 427 aa8.75□□□□□ -1.01
PTCH1-222ENST00000551425 CCDC58Q4VC31 144 aa8.75□□□□□ -1.01
PTCH1-222ENST00000551425 OR2G6Q5TZ20 316 aa8.75□□□□□ -1.01
PTCH1-222ENST00000551425 ZNF880Q6PDB4 577 aa8.75□□□□□ -1.01
PTCH1-222ENST00000551425 SVOPQ8N4V2 548 aa8.75□□□□□ -1.01
PTCH1-222ENST00000551425 TTC9CQ8N5M4 171 aa8.75□□□□□ -1.01
PTCH1-222ENST00000551425 SRSF12Q8WXF0 261 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms