RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 LINC00301Q8NCQ3 95 aa3.55□□□□□ -1.84
CPSF6-206ENST00000550987 OR11L1Q8NGX0 322 aa3.55□□□□□ -1.84
CPSF6-206ENST00000550987 OR2T29Q8NH02 315 aa3.55□□□□□ -1.84
CPSF6-206ENST00000550987 ZNF681Q96N22 645 aa3.55□□□□□ -1.84
CPSF6-206ENST00000550987 OLFM3Q96PB7 478 aa3.55□□□□□ -1.84
CPSF6-206ENST00000550987 QKIQ96PU8 341 aaKnown RBP eCLIP3.55□□□□□ -1.841e-6■■■■□ 22.9
CPSF6-206ENST00000550987 OR2V2Q96R30 315 aa3.55□□□□□ -1.84
CPSF6-206ENST00000550987 SDHCQ99643 169 aaPredicted RBP3.55□□□□□ -1.84
CPSF6-206ENST00000550987 ARL6Q9H0F7 186 aa3.55□□□□□ -1.84
CPSF6-206ENST00000550987 TPK1Q9H3S4 243 aa3.55□□□□□ -1.84
CPSF6-206ENST00000550987 RHOFQ9HBH0 211 aa3.55□□□□□ -1.84
CPSF6-206ENST00000550987 INIPQ9NRY2 104 aa3.55□□□□□ -1.84
CPSF6-206ENST00000550987 NLE1Q9NVX2 485 aaPredicted RBP3.55□□□□□ -1.84
CPSF6-206ENST00000550987 TAS2R1Q9NYW7 299 aa3.55□□□□□ -1.84
CPSF6-206ENST00000550987 IGHV5-51A0A0C4DH38 117 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 CXorf51AA0A1B0GTR3 108 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 PINLYPA6NC86 204 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 TSTD3H0UI37 97 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 PSMD12O00232 456 aaPredicted RBP3.54□□□□□ -1.84
CPSF6-206ENST00000550987 PFDN6O15212 129 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 SPAG7O75391 227 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 OXTP01178 125 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 APOC1P02654 83 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 RLN2P04090 185 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 PPICP45877 212 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 ZNF133P52736 654 aaPredicted RBP3.54□□□□□ -1.84
CPSF6-206ENST00000550987 TAS2R39P59534 338 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 CACNG7P62955 275 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 TAF1AQ15573 450 aaPredicted RBP3.54□□□□□ -1.84
CPSF6-206ENST00000550987 TAL2Q16559 108 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 TFDP3Q5H9I0 405 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 ACTL10Q5JWF8 245 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 WDFY1Q8IWB7 410 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 C11orf72Q8NBR9 251 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 OR10J5Q8NHC4 309 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 PIFOQ8TCI5 191 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 C16orf78Q8WTQ4 265 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 RASSF5Q8WWW0 418 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 RERGQ96A58 199 aaPredicted RBP3.54□□□□□ -1.84
CPSF6-206ENST00000550987 SMIM19Q96E16 107 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 PHB2Q99623 299 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 HSD17B10Q99714 261 aaKnown RBP3.54□□□□□ -1.84
CPSF6-206ENST00000550987 TMED9Q9BVK6 235 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 REG4Q9BYZ8 158 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 ALX4Q9H161 411 aaPredicted RBP3.54□□□□□ -1.84
CPSF6-206ENST00000550987 SPANXA1Q9NS26 97 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.54□□□□□ -1.84
CPSF6-206ENST00000550987 ZNF223Q9UK11 482 aaPredicted RBP3.54□□□□□ -1.84
CPSF6-206ENST00000550987 CES1P1Q9UKY3 287 aa3.54□□□□□ -1.84
CPSF6-206ENST00000550987 DOCK4Q8N1I0 1966 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 SMIM26A0A096LP01 95 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 A0A0J9YXV3 536 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 ANGPTL7O43827 346 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 CRYZL1O95825 349 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 GCGP01275 180 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 PPBPP02775 128 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 MT-ND4P03905 459 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 CRHP06850 196 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 NBEAP1P0C6P0 100 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 NELFEP18615 380 aaKnown RBP3.53□□□□□ -1.84
CPSF6-206ENST00000550987 PVALBP20472 110 aaPredicted RBP3.53□□□□□ -1.84
CPSF6-206ENST00000550987 HTR1DP28221 377 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 GGT2P36268 569 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 STC1P52823 247 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 SYNJ2BPP57105 145 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 ST3GAL4Q11206 333 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 KLHL12Q53G59 568 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 PYCR3Q53H96 274 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 SPIN4Q56A73 249 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 DHRS4L2Q6PKH6 230 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 FAM183BPQ6ZVS7 135 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 SLC36A1Q7Z2H8 476 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 SLC30A8Q8IWU4 369 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 OR10W1Q8NGF6 305 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 DOK4Q8TEW6 326 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 FLYWCH2Q96CP2 140 aaKnown RBP3.53□□□□□ -1.84
CPSF6-206ENST00000550987 KCTD7Q96MP8 289 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 OR2M4Q96R27 311 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 OSBPL11Q9BXB4 747 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 ZNF717Q9BY31 904 aaPredicted RBP3.53□□□□□ -1.84
CPSF6-206ENST00000550987 RRAGDQ9NQL2 400 aaPredicted RBP3.53□□□□□ -1.84
CPSF6-206ENST00000550987 ZNF331Q9NQX6 463 aaPredicted RBP3.53□□□□□ -1.84
CPSF6-206ENST00000550987 ZNF391Q9UJN7 358 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 ACOT9Q9Y305 439 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 PCYT1BQ9Y5K3 369 aaPredicted RBP3.53□□□□□ -1.84
CPSF6-206ENST00000550987 ANKRD12Q6UB98 2062 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 CCDC88CQ9P219 2028 aa3.53□□□□□ -1.84
CPSF6-206ENST00000550987 IGHV1-69DA0A0B4J2H0 117 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 KIR2DS1A0A191URI9 304 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 TVP23AA6NH52 213 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 EFCAB9A8MZ26 197 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 DISC1C4P0D8 188 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 F5H768 121 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 CCRL2O00421 344 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 CXCR6O00574 342 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 FGF16O43320 207 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 CHP2O43745 196 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 CST8O60676 142 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 MPZL1O95297 269 aa3.52□□□□□ -1.85
CPSF6-206ENST00000550987 ATP6V1G2O95670 118 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms