RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TECRQ9NZ01 308 aaKnown RBP7.42□□□□□ -1.22
TRAFD1-207ENST00000550051 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 FAM223BA6NKX1 122 aa7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 FOXI3A8MTJ6 420 aaPredicted RBP7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 TRDCB7Z8K6 153 aa7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 BMPR1BO00238 502 aa7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 RRASP10301 218 aa7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 TMEM50BP56557 158 aa7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 FAM223AQ8IWN6 122 aa7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 NANOGP1Q8N7R0 232 aa7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 HDHD3Q9BSH5 251 aaPredicted RBP7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 URM1Q9BTM9 101 aaKnown RBP7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 AKIP1Q9NQ31 210 aa7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 C12orf4Q9NQ89 552 aa7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 PLCXD1Q9NUJ7 323 aa7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 COA4Q9NYJ1 87 aa7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 ZNF230Q9UIE0 474 aaPredicted RBP7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 DMRT1Q9Y5R6 373 aa7.41□□□□□ -1.22
TRAFD1-207ENST00000550051 C2orf70A6NJV1 201 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 FAM229AH3BQW9 127 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 LGALS9O00182 355 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 SHOXO15266 292 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 DIRAS3O95661 229 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 FOLR2P14207 255 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 UBE2KP61086 200 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 RHOGP84095 191 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 DEFA5Q01523 94 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 ATP5G2Q06055 141 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 TPBGQ13641 420 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 INSL4Q14641 139 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 PRSS8Q16651 343 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 TTC9CQ8N5M4 171 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 NECAP1Q8NC96 275 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 SETD9Q8NE22 299 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 OR6M1Q8NGM8 313 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 OR4A4PQ8NGN8 299 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 HARBI1Q96MB7 349 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 OVOL2Q9BRP0 275 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 SRD5A3Q9H8P0 318 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 SDHAF2Q9NX18 166 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 PSORS1C1Q9UIG5 152 aa7.4□□□□□ -1.22
TRAFD1-207ENST00000550051 LY6G6CO95867 125 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 CBLN1P23435 193 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 ZNF45Q02386 682 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 CBX3Q13185 183 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 RTL8BQ17RB0 113 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 LAIR2Q6ISS4 152 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 GPHB5Q86YW7 130 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 WFDC3Q8IUB2 231 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 DYNLRB2Q8TF09 96 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 SRSF12Q8WXF0 261 aaKnown RBP7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 DDB2Q92466 427 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 ARHGAP5-AS1Q96IT6 56 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 ADTRPQ96IZ2 230 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 PHB2Q99623 299 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 CMSS1Q9BQ75 279 aaKnown RBP7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 ST6GALNAC5Q9BVH7 336 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 PECRQ9BY49 303 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 WFDC10AQ9H1F0 79 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 KCNK15Q9H427 330 aa7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 PLECQ15149 4684 aaKnown RBP7.39□□□□□ -1.23
TRAFD1-207ENST00000550051 TRBV6-7A0A0A0MS04 114 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 SLC17A2O00624 439 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 MYL12BO14950 172 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 GGCTO75223 188 aaKnown RBP7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 TUSC2O75896 110 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 UCHL1P09936 223 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 APELAP0DMC3 54 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 EXOSC2Q13868 293 aaKnown RBP7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 TNXAQ16473 311 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 GUCA2BQ16661 112 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 VMA21Q3ZAQ7 101 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 HSD17B12Q53GQ0 312 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 PLAC9Q5JTB6 97 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 RBM48Q5RL73 367 aaKnown RBP7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 SLC16A13Q7RTY0 426 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 CEACAM19Q7Z692 300 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 SLC25A42Q86VD7 318 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 DHRSXQ8N5I4 330 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 OR10J5Q8NHC4 309 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 OSR1Q8TAX0 266 aaPredicted RBP7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 FBLIM1Q8WUP2 373 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 CYGBQ8WWM9 190 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 WDR89Q96FK6 387 aaPredicted RBP7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 SPIN2AQ99865 258 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 SPIN2BQ9BPZ2 258 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 OR2D2Q9H210 308 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 C8orf4Q9NR00 106 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 FKBP14Q9NWM8 211 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 ALMS1Q8TCU4 4167 aa7.38□□□□□ -1.23
TRAFD1-207ENST00000550051 FRAS1Q86XX4 4008 aa7.37□□□□□ -1.23
TRAFD1-207ENST00000550051 LOC102724200A0A096LPH7 203 aaPredicted RBP7.37□□□□□ -1.23
TRAFD1-207ENST00000550051 NUPR2A6NF83 97 aa7.37□□□□□ -1.23
TRAFD1-207ENST00000550051 MPPED1O15442 326 aa7.37□□□□□ -1.23
TRAFD1-207ENST00000550051 FABP7O15540 132 aa7.37□□□□□ -1.23
TRAFD1-207ENST00000550051 OR2C1O95371 312 aa7.37□□□□□ -1.23
TRAFD1-207ENST00000550051 PRH1P02810 166 aa7.37□□□□□ -1.23
TRAFD1-207ENST00000550051 CDK1P06493 297 aa7.37□□□□□ -1.23
TRAFD1-207ENST00000550051 ATF4P18848 351 aaPredicted RBP7.37□□□□□ -1.23
TRAFD1-207ENST00000550051 DUTP33316 252 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms