RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 RBM7Q9Y580 266 aaKnown RBP8.21□□□□□ -1.1
RAB5B-206ENST00000549505 PPIAL4EA0A075B759 164 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 TMEM8BA6NDV4 472 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 PPIAL4DF5H284 164 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 PPIAL4FP0DN26 164 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 FLI1Q01543 452 aaPredicted RBP8.2□□□□□ -1.1
RAB5B-206ENST00000549505 TLE1Q04724 770 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 PEA15Q15121 130 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 CBLN2Q8IUK8 224 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 OR4S2Q8NH73 311 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 PINX1Q96BK5 328 aaKnown RBP8.2□□□□□ -1.1
RAB5B-206ENST00000549505 RBMXL1Q96E39 390 aaKnown RBP8.2□□□□□ -1.1
RAB5B-206ENST00000549505 LRRC46Q96FV0 321 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 OR4C12Q96R67 309 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 TMEM14BQ9NUH8 114 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 PPIAL4AQ9Y536 164 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 KPTNQ9Y664 436 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 CD3EP07766 207 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 G6PCP35575 357 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 HOXA1P49639 335 aaPredicted RBP8.2□□□□□ -1.1
RAB5B-206ENST00000549505 ZNF672Q499Z4 452 aaPredicted RBP8.2□□□□□ -1.1
RAB5B-206ENST00000549505 ZNF808Q8N4W9 903 aaPredicted RBP8.2□□□□□ -1.1
RAB5B-206ENST00000549505 TPRX1Q8N7U7 411 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 TNFRSF14Q92956 283 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 R3HDM4Q96D70 268 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 PCGF1Q9BSM1 259 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 HBE1P02100 147 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 S100A9P06702 114 aaKnown RBP8.2□□□□□ -1.1
RAB5B-206ENST00000549505 NQO2P16083 231 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 PCP4P48539 62 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 BSXQ3C1V8 233 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 VHLLQ6RSH7 139 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 H2BFWTQ7Z2G1 175 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 NKX6-2Q9C056 277 aaPredicted RBP8.2□□□□□ -1.1
RAB5B-206ENST00000549505 SAP30LQ9HAJ7 183 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 NDRG3Q9UGV2 375 aa8.2□□□□□ -1.1
RAB5B-206ENST00000549505 DEFB108AA8MXU0 73 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 IFNA5P01569 189 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 EDDM3AQ14507 147 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 ZNF506Q5JVG8 444 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 CLEC9AQ6UXN8 241 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 OR4A5Q8NH83 315 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 ST6GALNAC6Q969X2 333 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 PLPPR2Q96GM1 343 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 PFDN5Q99471 154 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 CCL13Q99616 98 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 TMEM147Q9BVK8 224 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 TUBA4BQ9H853 241 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 GNG12Q9UBI6 72 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 SAA2-SAA4A0A096LPE2 208 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 SLC31A2O15432 143 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 SIAH2O43255 324 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 SNAPINO95295 136 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 TSPAN15O95858 294 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 GYPAP02724 150 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 SAA2P0DJI9 122 aaPredicted RBP8.19□□□□□ -1.1
RAB5B-206ENST00000549505 MAS1LP35410 378 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 SNRPEP62304 92 aaKnown RBP8.19□□□□□ -1.1
RAB5B-206ENST00000549505 TMEM155Q4W5P6 130 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 C11orf71Q6IPW1 123 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 Q8N7P7 452 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 UBALD1Q8TB05 177 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 DTD1Q8TEA8 209 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 ZCCHC14Q8WYQ9 949 aaKnown RBP8.19□□□□□ -1.1
RAB5B-206ENST00000549505 PBDC1Q9BVG4 233 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 HRH4Q9H3N8 390 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 UNKLQ9H9P5 680 aaKnown RBP8.19□□□□□ -1.1
RAB5B-206ENST00000549505 CUL9Q8IWT3 2517 aa8.19□□□□□ -1.1
RAB5B-206ENST00000549505 C15orf61A6NNL5 157 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 C15orf62A8K5M9 175 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 C9JQL5 133 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 OR9G9P0C7N8 305 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 OMGP23515 440 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 CAMLGP49069 296 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 RPP30P78346 268 aaKnown RBP8.18□□□□□ -1.1
RAB5B-206ENST00000549505 TLE4Q04727 773 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 PVRIGQ6DKI7 326 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 DUX4L9Q6RFH8 374 aaPredicted RBP8.18□□□□□ -1.1
RAB5B-206ENST00000549505 ZNF383Q8NA42 475 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 OR5AN1Q8NGI8 311 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 SLC25A10Q9UBX3 287 aaPredicted RBP8.18□□□□□ -1.1
RAB5B-206ENST00000549505 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.18□□□□□ -1.1
RAB5B-206ENST00000549505 MPDU1O75352 247 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 CST7O76096 145 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 F12P00748 615 aaPredicted RBP8.18□□□□□ -1.1
RAB5B-206ENST00000549505 IGHV2-70P01814 119 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 HSPB1P04792 205 aaKnown RBP8.18□□□□□ -1.1
RAB5B-206ENST00000549505 RAB13P51153 203 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 GUK1Q16774 197 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 TMEM177Q53S58 311 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 TMEM200BQ69YZ2 307 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 C11orf42Q8N5U0 333 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 FAM216BQ8N7L0 139 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 RFESDQ8TAC1 157 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 TAF15Q92804 592 aaKnown RBP eCLIP8.18□□□□□ -1.1
RAB5B-206ENST00000549505 RAB39BQ96DA2 213 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 S1PR3Q99500 378 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 BET1LQ9NYM9 111 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 IGHV3-43A0A0B4J1X8 118 aa8.18□□□□□ -1.1
RAB5B-206ENST00000549505 GOSR1O95249 250 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms