RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 RPS2P15880 293 aaKnown RBP5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 PVALBP20472 110 aaPredicted RBP5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 F2RP25116 425 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 UCP1P25874 307 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 IL3RAP26951 378 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 PSMB6P28072 239 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 SSTR5P35346 364 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 KIR2DS2P43631 304 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 GPR12P47775 334 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 SUPT4H1P63272 117 aaKnown RBP5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 TMEM187Q14656 261 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 IAH1Q2TAA2 248 aaPredicted RBP5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 ANKRD55Q3KP44 614 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 C11orf87Q6NUJ2 197 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 ZNF818PQ6ZRF7 136 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 FAM216BQ8N7L0 139 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 TPRX1Q8N7U7 411 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 ZBTB8BQ8NAP8 495 aaPredicted RBP5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 OR52L2PQ8NGH6 319 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 MRAPQ8TCY5 172 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 RBPMSQ93062 196 aaKnown RBP5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 RRNAD1Q96FB5 475 aaKnown RBP5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 NEIL1Q96FI4 390 aaPredicted RBP5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 ADTRPQ96IZ2 230 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 ZNF48Q96MX3 618 aaPredicted RBP5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 ZNF714Q96N38 554 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 TMEM246Q9BRR3 403 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 GON7Q9BXV9 100 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 KRTAP9-3Q9BYQ3 159 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 OR2D2Q9H210 308 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 GFOD1Q9NXC2 390 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 PIPOXQ9P0Z9 390 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 CACFD1Q9UGQ2 172 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 NUP50Q9UKX7 468 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 PAIP2BQ9ULR5 123 aaKnown RBP5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 GAB2Q9UQC2 676 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 PRELID3BQ9Y3B1 194 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 HSPB11Q9Y547 144 aa5.8□□□□□ -1.48
DEPDC4-208ENST00000549341 IGKV1D-13A0A0B4J2D9 117 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 MDFIC2A0A1B0GVS7 189 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 SMLR1H3BR10 107 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 CCSO14618 274 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 DVL1O14640 695 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 RAB29O14966 203 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 OR2F2O95006 317 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 CDS2O95674 445 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 IGHV2-5P01817 119 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 IGKV1-13P0DP09 117 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 VDAC1P21796 283 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 GATA3P23771 443 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 PPP1CCP36873 323 aaKnown RBP5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 NKX2-5P52952 324 aaPredicted RBP5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 H2BFSP57053 126 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 OR2F1Q13607 317 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 GNMTQ14749 295 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 LTC4SQ16873 150 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 SP6Q3SY56 376 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 MORN2Q502X0 79 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 TMEM268Q5VZI3 342 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 GGNBP1Q5YKI7 109 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 TMEM65Q6PI78 240 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 ZNF546Q86UE3 836 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 LDLRAD3Q86YD5 345 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 OR4F5Q8NH21 305 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 OR51H1Q8NH63 302 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 GRPEL2Q8TAA5 225 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 RFESDQ8TAC1 157 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 UBALD1Q8TB05 177 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 GLYATL2Q8WU03 294 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 PPP1R1CQ8WVI7 109 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 ABHD14BQ96IU4 210 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 SEC22AQ96IW7 307 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 CYYR1Q96J86 154 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 TMEM56Q96MV1 263 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 S1PR3Q99500 378 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 CITED1Q99966 193 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 AIFM2Q9BRQ8 373 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 ABHD14AQ9BUJ0 271 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 MS4A7Q9GZW8 240 aaPredicted RBP5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 TMEM222Q9H0R3 208 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 LINC00574Q9H8X3 128 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 ZC4H2Q9NQZ6 224 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 GSKIPQ9P0R6 139 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 PSG11Q9UQ72 335 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 TMEM56-RWDD3S4R434 201 aa5.79□□□□□ -1.48
DEPDC4-208ENST00000549341 IGHV3-43A0A0B4J1X8 118 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 KANTRA0A1W2PQU2 76 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 WRBO00258 174 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 HOXA3O43365 443 aaPredicted RBP5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 TNFSF12O43508 249 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 ADAP1O75689 374 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 MPC2O95563 127 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 IGHV2-70P01814 119 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 TFF1P04155 84 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 CRYBA1P05813 215 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 IGHV3-43DP0DP04 118 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 SLC25A6P12236 298 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 NFYBP25208 207 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 THBS3P49746 956 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms