RNA–Protein interactions for RNA: ENST00000549064.1

LIMA1-204, Transcript of LIM domain and actin binding 1, humanhuman

TSL 2

Gene LIMA1, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-204ENST00000549064 DGCR6LQ9BY27 220 aa4.79□□□□□ -1.64
LIMA1-204ENST00000549064 MRPL20Q9BYC9 149 aaKnown RBP4.79□□□□□ -1.64
LIMA1-204ENST00000549064 BARHL1Q9BZE3 327 aa4.79□□□□□ -1.64
LIMA1-204ENST00000549064 PARP12Q9H0J9 701 aaKnown RBP4.79□□□□□ -1.64
LIMA1-204ENST00000549064 NCOR1P1Q9H4R4 102 aa4.79□□□□□ -1.64
LIMA1-204ENST00000549064 FAM118AQ9NWS6 357 aa4.79□□□□□ -1.64
LIMA1-204ENST00000549064 ABCD2Q9UBJ2 740 aa4.79□□□□□ -1.64
LIMA1-204ENST00000549064 IGLV5-37A0A075B6J1 123 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 LOC107986453A0A1B0GWG9 222 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 ARPC2O15144 300 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 KRT36O76013 467 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 COX4I1P13073 169 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 CTRB1P17538 263 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 PSME3P61289 254 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 TMEM267Q0VDI3 215 aaPredicted RBP4.78□□□□□ -1.64
LIMA1-204ENST00000549064 ZSCAN26Q16670 478 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 RPEL1Q2QD12 228 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 DEFB114Q30KQ6 69 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 CTRB2Q6GPI1 263 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 SSX6Q7RTT6 188 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 C8orf31Q8N9H6 132 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 NPBQ8NG41 125 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 OR5T1Q8NG75 326 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 OR52M1Q8NGK5 317 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 OR10AC1Q8NH08 325 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 DYNLRB2Q8TF09 96 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 RPL36ALQ969Q0 106 aaKnown RBP4.78□□□□□ -1.64
LIMA1-204ENST00000549064 HOPXQ9BPY8 73 aaPredicted RBP4.78□□□□□ -1.64
LIMA1-204ENST00000549064 SIKE1Q9BRV8 207 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 RIMS4Q9H426 269 aaPredicted RBP4.78□□□□□ -1.64
LIMA1-204ENST00000549064 GORASP2Q9H8Y8 452 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 PEF1Q9UBV8 284 aaKnown RBP4.78□□□□□ -1.64
LIMA1-204ENST00000549064 TMEM14AQ9Y6G1 99 aa4.78□□□□□ -1.64
LIMA1-204ENST00000549064 APOBP04114 4563 aaKnown RBP4.78□□□□□ -1.64
LIMA1-204ENST00000549064 IGLL5B9A064 214 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 LANCL1O43813 399 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 GMNNO75496 209 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 OR2A4O95047 310 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 PRSS2P07478 247 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 PRKACBP22694 351 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 CD40LGP29965 261 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 KIR2DS2P43631 304 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 PLGLAQ15195 96 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 RBMY1FQ15415 496 aaKnown RBP4.77□□□□□ -1.65
LIMA1-204ENST00000549064 TATDN3Q17R31 274 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 MICAQ29983 383 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 PIGYQ3MUY2 71 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 AKIRIN2Q53H80 203 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 TMEM236Q5W0B7 351 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 OR4A47Q6IF82 309 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 CGB2Q6NT52 195 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 SLC16A13Q7RTY0 426 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 SLC35F2Q8IXU6 374 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 PRSS35Q8N3Z0 413 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 SUMF2Q8NBJ7 301 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 OR10G2Q8NGC3 310 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 OR10K1Q8NGX5 313 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 PP6455Q8WZ26 134 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 FGGYQ96C11 551 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 NSMCE2Q96MF7 247 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 TBX5Q99593 518 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 URM1Q9BTM9 101 aaKnown RBP4.77□□□□□ -1.65
LIMA1-204ENST00000549064 SCRT2Q9NQ03 307 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 ZC4H2Q9NQZ6 224 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 GNG12Q9UBI6 72 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 UBQLN2Q9UHD9 624 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 TP53TG1Q9Y2A0 90 aa4.77□□□□□ -1.65
LIMA1-204ENST00000549064 SAMHD1Q9Y3Z3 626 aaKnown RBP4.77□□□□□ -1.65
LIMA1-204ENST00000549064 TMEM30CPA0ZSE6 113 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 BMPR1BO00238 502 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 MAGEB3O15480 346 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 CDK2AP2O75956 126 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 CA2P00918 260 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 IFNA4P05014 189 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 HMGN1P05114 100 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 OCM2P0CE71 109 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 OCMP0CE72 109 aaPredicted RBP4.76□□□□□ -1.65
LIMA1-204ENST00000549064 AREGP15514 252 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 GZMHP20718 246 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 EPHA2P29317 976 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 OR3A3P47888 321 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 ACTR3P61158 418 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 PAX5Q02548 391 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 GAMTQ14353 236 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 GNMTQ14749 295 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 MOGAT2Q3SYC2 334 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 ZNF343Q6P1L6 599 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 FAM131AQ6UXB0 335 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 HACD2Q6Y1H2 254 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 UTS2BQ765I0 119 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 C5orf24Q7Z6I8 188 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 SAXO1Q8IYX7 474 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 TMEM61Q8N0U2 210 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 OR52B4Q8NGK2 314 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 OR13C9Q8NGT0 318 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 OR1L1Q8NH94 360 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 GRPEL2Q8TAA5 225 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 CACNG8Q8WXS5 425 aa4.76□□□□□ -1.65
LIMA1-204ENST00000549064 MYCBPQ99417 103 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms