RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 AESQ08117 197 aa8.25□□□□□ -1.09
SMARCD1-205ENST00000548573 ALKBH6Q3KRA9 238 aa8.25□□□□□ -1.09
SMARCD1-205ENST00000548573 BTNL3Q6UXE8 466 aa8.25□□□□□ -1.09
SMARCD1-205ENST00000548573 COQ2Q96H96 371 aa8.25□□□□□ -1.09
SMARCD1-205ENST00000548573 PLA2G3Q9NZ20 509 aa8.25□□□□□ -1.09
SMARCD1-205ENST00000548573 KLF13Q9Y2Y9 288 aaPredicted RBP8.25□□□□□ -1.09
SMARCD1-205ENST00000548573 LINC00473A8K010 186 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 KLRC4-KLRK1H3BQV0 150 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 TNFSF15O95150 251 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 NDUFB4O95168 129 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 CRYAAP02489 173 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 SP1P08047 785 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 CELA3BP08861 270 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 SNRPCP09234 159 aaKnown RBP8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 OR4A8P0C604 315 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 DEFA4P12838 97 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 CD82P27701 267 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 OPRK1P41145 380 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 MEOX1P50221 254 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 SOX8P57073 446 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 YPEL3P61236 119 aaPredicted RBP8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 NUTF2P61970 127 aaKnown RBP8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 RPP30P78346 268 aaKnown RBP8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 PSG7Q13046 419 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 PRSS8Q16651 343 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 DCAF10Q5QP82 559 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 CST9LP1Q5W188 147 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 FAM53AQ6NSI3 398 aaPredicted RBP8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 MED12LQ86YW9 2145 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 OR5T1Q8NG75 326 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 SFRP2Q96HF1 295 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 FKBP11Q9NYL4 201 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 ELOVL5Q9NYP7 299 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 WASF3Q9UPY6 502 aa8.24□□□□□ -1.09
SMARCD1-205ENST00000548573 TRAV38-1A0A0B4J264 116 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 C21orf140B9A014 251 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 C9orf172C9J069 976 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 GABRA2P47869 451 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 TMPRSS3P57727 454 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 ERVFC1-1P60608 527 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 UBE2NP61088 152 aaKnown RBP8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 C1orf194Q5T5A4 169 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 LINC00696Q6ZRV3 163 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 TGIF2LXQ8IUE1 241 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 C11orf53Q8IXP5 236 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 MRGPRDQ8TDS7 321 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 R3HDM4Q96D70 268 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 NEU1Q99519 415 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 QTRT1Q9BXR0 403 aaKnown RBP8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 TRAV9-1A0A075B6T8 112 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 MDFIC2A0A1B0GVS7 189 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 IFNL4K9M1U5 179 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 ADH4P08319 380 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 C1QTNF9P0C862 333 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 STAG3L2P0CL84 134 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 STAG3L3P0CL85 134 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 EGR1P18146 543 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 UBE2G2P60604 165 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 HTD2P86397 168 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 TGFBR3Q03167 851 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 TRIP6Q15654 476 aaKnown RBP8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 ZNF124Q15973 351 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 PDLIM3Q53GG5 364 aaPredicted RBP8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 SPINK9Q5DT21 86 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 GCSAMLQ5JQS6 135 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 TRAT1Q6PIZ9 186 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 ACP7Q6ZNF0 438 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 Q6ZR03 302 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 VASH2Q86V25 355 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 TMEM105Q8N8V8 129 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 MDS2Q8NDY4 140 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 OR52E5Q8NH55 327 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 SGMS2Q8NHU3 365 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 FAM216AQ8WUB2 273 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 DERL1Q9BUN8 251 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 OBP2BQ9NPH6 170 aa8.23□□□□□ -1.09
SMARCD1-205ENST00000548573 KIR2DL5BA0A0G2JN68 375 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 KIR2DL5BA0A0G2JPC4 375 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 IGHV3-64DA0A0J9YX35 117 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 WNT9BO14905 357 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 TCAPO15273 167 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 GALR2O43603 387 aaPredicted RBP8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 CXorf1O96002 111 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 HPRT1P00492 218 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 OR9G9P0C7N8 305 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 OR10J1P30954 320 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 EDDM3BP56851 147 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 FOXF2Q12947 444 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 KIR2DL5AQ8N109 375 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 ZNF114Q8NC26 417 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 KLF14Q8TD94 323 aaPredicted RBP8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 CXXC4Q9H2H0 198 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 NAGKQ9UJ70 344 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 EREGO14944 169 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 RBFOX2O43251 390 aaKnown RBP eCLIP8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 SCGB1D1O95968 90 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 KITLGP21583 273 aa8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 DUTP33316 252 aaKnown RBP8.22□□□□□ -1.09
SMARCD1-205ENST00000548573 SSTR5P35346 364 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms