RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 SPCS3P61009 180 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 EWSR1Q01844 656 aaKnown RBP eCLIP11.02□□□□□ -0.65
PTCH1-215ENST00000547672 POU2AF1Q16633 256 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 RPL39P5Q59GN2 51 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 OR2B11Q5JQS5 317 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 AVPI1Q5T686 147 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 TMEM252Q8N6L7 170 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 OR1S2Q8NGQ3 325 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 LEAP2Q969E1 77 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 MARVELD3Q96A59 401 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 C5orf30Q96GV9 206 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 ZNF251Q9BRH9 671 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 SSBP3Q9BWW4 388 aaPredicted RBP11.02□□□□□ -0.65
PTCH1-215ENST00000547672 CLEC7AQ9BXN2 247 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 MAGT1Q9H0U3 335 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 C11orf1Q9H5F2 150 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 CYTL1Q9NRR1 136 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 SLC35D1Q9NTN3 355 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 PSENENQ9NZ42 101 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 FBXL17Q9UF56 701 aa11.02□□□□□ -0.65
PTCH1-215ENST00000547672 SLC31A2O15432 143 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 PROP1O75360 226 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 IFNA5P01569 189 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 SULT1A1P50225 295 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 RAB5CP51148 216 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 ATP5IP56385 69 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-215ENST00000547672 ATP6V1FQ16864 119 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 AARDQ4LEZ3 155 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 FAM53AQ6NSI3 398 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-215ENST00000547672 Q6ZRM9 215 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 ODF3L1Q8IXM7 274 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 SLC7A5P1Q8MH63 180 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 KIR3DL3Q8N743 410 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 BEND2Q8NDZ0 799 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 VSTM2AQ8TAG5 236 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 GNPNAT1Q96EK6 184 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-215ENST00000547672 SAT2Q96F10 170 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-215ENST00000547672 FAM210AQ96ND0 272 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 TSNAXQ99598 290 aaKnown RBP11.01□□□□□ -0.65
PTCH1-215ENST00000547672 HIPK2Q9H2X6 1198 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 PRNDQ9UKY0 176 aa11.01□□□□□ -0.65
PTCH1-215ENST00000547672 FAM208BQ5VWN6 2430 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 PKDREJQ9NTG1 2253 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 A0A0G2JRQ6 117 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 FAM24AA6NFZ4 105 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 KIAA1324LA8MWY0 1029 aaPredicted RBP11□□□□□ -0.65
PTCH1-215ENST00000547672 NDUFS8O00217 210 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 MMP23AO75900 390 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 IFNA17P01571 189 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 IGHV3-7P01780 117 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 SEC11BP0C7V7 166 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 COX6B1P14854 86 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 CEACAM3P40198 252 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 BRWD1-AS2P59051 145 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 BLOC1S1P78537 153 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 ZNF429Q86V71 674 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 PDPNQ86YL7 162 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 TGIF2LXQ8IUE1 241 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 OR4C13Q8NGP0 309 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 OR4A5Q8NH83 315 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 LHX4Q969G2 390 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 RHOVQ96L33 236 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 ARV1Q9H2C2 271 aa11□□□□□ -0.65
PTCH1-215ENST00000547672 STRAPQ9Y3F4 350 aaKnown RBP11□□□□□ -0.65
PTCH1-215ENST00000547672 YLPM1P49750 1951 aaKnown RBP10.99□□□□□ -0.65
PTCH1-215ENST00000547672 A0A1W2PPE3 182 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 CEBPZOSA8MTT3 80 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 KCNAB3O43448 404 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 ENSAO43768 121 aaKnown RBP10.99□□□□□ -0.65
PTCH1-215ENST00000547672 CRYZL1O95825 349 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 FGF2P09038 288 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 CT45A6P0DMU7 189 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 CT45A5P0DMU8 189 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 CT45A7P0DMV0 189 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 CDKN1AP38936 164 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 LGALS7P47929 136 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 DSCR9P59020 149 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 PDLIM3Q53GG5 364 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-215ENST00000547672 RPL7L1Q6DKI1 246 aaKnown RBP10.99□□□□□ -0.65
PTCH1-215ENST00000547672 ZNF383Q8NA42 475 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 OR5AN1Q8NGI8 311 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 SCGB1C1Q8TD33 95 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 DTD1Q8TEA8 209 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 PINX1Q96BK5 328 aaKnown RBP10.99□□□□□ -0.65
PTCH1-215ENST00000547672 FLYWCH2Q96CP2 140 aaKnown RBP10.99□□□□□ -0.65
PTCH1-215ENST00000547672 CCL19Q99731 98 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 GINS3Q9BRX5 216 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 RBKSQ9H477 322 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 ENY2Q9NPA8 101 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 NUP50Q9UKX7 468 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 WASHC3Q9Y3C0 194 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 NBEAQ8NFP9 2946 aa10.99□□□□□ -0.65
PTCH1-215ENST00000547672 SPTBN1Q01082 2364 aaKnown RBP10.98□□□□□ -0.65
PTCH1-215ENST00000547672 UMAD1C9J7I0 102 aa10.98□□□□□ -0.65
PTCH1-215ENST00000547672 H7C2Y5 167 aa10.98□□□□□ -0.65
PTCH1-215ENST00000547672 SHOXO15266 292 aa10.98□□□□□ -0.65
PTCH1-215ENST00000547672 FCN3O75636 299 aa10.98□□□□□ -0.65
PTCH1-215ENST00000547672 PAX9P55771 341 aa10.98□□□□□ -0.65
PTCH1-215ENST00000547672 NHLH2Q02577 135 aa10.98□□□□□ -0.65
PTCH1-215ENST00000547672 TMEM177Q53S58 311 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms