RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 TRAV9-1A0A075B6T8 112 aa9.02□□□□□ -0.97
NPAS3-205ENST00000547068 IGHV2OR16-5A0A0B4J2B6 119 aa9.02□□□□□ -0.97
NPAS3-205ENST00000547068 IGHV2-70DA0A0C4DH43 119 aa9.02□□□□□ -0.97
NPAS3-205ENST00000547068 LY6G6EA0A0G2JKS1 128 aa9.02□□□□□ -0.97
NPAS3-205ENST00000547068 CBY3A6NI87 242 aa9.02□□□□□ -0.97
NPAS3-205ENST00000547068 FAM166BA8MTA8 275 aa9.02□□□□□ -0.97
NPAS3-205ENST00000547068 A8MXE2 369 aa9.02□□□□□ -0.97
NPAS3-205ENST00000547068 FAM90A26D6RGX4 464 aa9.02□□□□□ -0.97
NPAS3-205ENST00000547068 ZNF32P17041 273 aa9.02□□□□□ -0.97
NPAS3-205ENST00000547068 FKBP2P26885 142 aaKnown RBP9.02□□□□□ -0.97
NPAS3-205ENST00000547068 ZNF585BQ52M93 769 aa9.02□□□□□ -0.97
NPAS3-205ENST00000547068 WDR74Q6RFH5 385 aaPredicted RBP9.02□□□□□ -0.97
NPAS3-205ENST00000547068 SMIM15Q7Z3B0 74 aa9.02□□□□□ -0.97
NPAS3-205ENST00000547068 TCTEX1D1Q8N7M0 179 aa9.02□□□□□ -0.97
NPAS3-205ENST00000547068 NFAM1Q8NET5 270 aaPredicted RBP9.02□□□□□ -0.97
NPAS3-205ENST00000547068 OR10P1Q8NGE3 313 aa9.02□□□□□ -0.97
NPAS3-205ENST00000547068 APOBEC3DQ96AK3 386 aaPredicted RBP9.02□□□□□ -0.97
NPAS3-205ENST00000547068 GMPPAQ96IJ6 420 aaPredicted RBP9.02□□□□□ -0.97
NPAS3-205ENST00000547068 QTRT1Q9BXR0 403 aaKnown RBP9.02□□□□□ -0.97
NPAS3-205ENST00000547068 GNB4Q9HAV0 340 aa9.02□□□□□ -0.97
NPAS3-205ENST00000547068 RBM7Q9Y580 266 aaKnown RBP9.02□□□□□ -0.97
NPAS3-205ENST00000547068 U3KQA8 63 aa9.02□□□□□ -0.97
NPAS3-205ENST00000547068 SLC17A3O00476 420 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 TIAF1O95411 115 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 PMCHP20382 165 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 ACP1P24666 158 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 TSPOP30536 169 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 HLA-DRB5Q30154 266 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 MUC6Q6W4X9 2439 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 ANKRD37Q7Z713 158 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 OCC1Q8TAD7 63 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 VPS25Q9BRG1 176 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 WNT10AQ9GZT5 417 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 SLC35D1Q9NTN3 355 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 LIN7CQ9NUP9 197 aaKnown RBP9.01□□□□□ -0.97
NPAS3-205ENST00000547068 OTOGLQ3ZCN5 2332 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 ASXL3Q9C0F0 2248 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 ZNF407Q9C0G0 2248 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 DPRXA6NFQ7 191 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 C17orf112F2Z3M2 114 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 GDF9O60383 454 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 VAMP5O95183 116 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 IGLV2-14P01704 120 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 IGHEP01854 428 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 PPBPP02775 128 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 CARD18P57730 90 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 RPS16P62249 146 aaKnown RBP9.01□□□□□ -0.97
NPAS3-205ENST00000547068 CCL7P80098 99 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 NHLH1Q02575 133 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 KMT5CQ86Y97 462 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 FGFRL1Q8N441 504 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 CCDC74BQ96LY2 380 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 CHODLQ9H9P2 273 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 OR1A1Q9P1Q5 309 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 HSPB7Q9UBY9 170 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 KCNS2Q9ULS6 477 aa9.01□□□□□ -0.97
NPAS3-205ENST00000547068 MRPS16Q9Y3D3 137 aaKnown RBP9.01□□□□□ -0.97
NPAS3-205ENST00000547068 SPEGQ15772 3267 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 M0QZ24 198 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 FRMD6-AS1P0C7T7 363 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 B4GALT1P15291 398 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 PRAMEF20Q5VT98 475 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 FAM122AQ96E09 287 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 KCNS1Q96KK3 526 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 CLN8Q9UBY8 286 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 DIDO1Q9BTC0 2240 aaKnown RBP9□□□□□ -0.97
NPAS3-205ENST00000547068 TRAV38-1A0A0B4J264 116 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 A0A1W2PPV4 95 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 WDR1O75083 606 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 TNFSF4P23510 183 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 LGALS4P56470 323 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 ASCL5Q7RTU5 278 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 GCNT2Q8N0V5 402 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 OR5A2Q8NGI9 324 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 TMEM204Q9BSN7 226 aa9□□□□□ -0.97
NPAS3-205ENST00000547068 A0A1W2PQM1 296 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 PMS2P5A8MQ11 134 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 TRAPPC2LH3BP13 241 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 C3orf79P0CE67 100 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 GPM6AP51674 278 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 PRRX1P54821 245 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 RAC1P63000 192 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 HTD2P86397 168 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 GCSAMLQ5JQS6 135 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 SAXO1Q8IYX7 474 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 ATOH7Q8N100 152 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 ZIC4Q8N9L1 334 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 MTCH1Q9NZJ7 389 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 NAT8BQ9UHF3 227 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 EP300Q09472 2414 aaPredicted RBP8.99□□□□□ -0.97
NPAS3-205ENST00000547068 TRBV9A0A0B4J1U6 114 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 SCO2A0A1W2PP80 73 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 A0A1W2PS18 150 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 ZNF83P51522 516 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 CFHR1Q03591 330 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 VAMP3Q15836 100 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 RPEL1Q2QD12 228 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 OR10J3Q5JRS4 329 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 MKXQ8IYA7 352 aa8.99□□□□□ -0.97
NPAS3-205ENST00000547068 RCHY1Q96PM5 261 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms