RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SOHLH1Q5JUK2 328 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 HAPLN4Q86UW8 402 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 DTD1Q8TEA8 209 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 ATP5SQ99766 215 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 UTP20O75691 2785 aaKnown RBP10.55□□□□□ -0.72
SCAF11-209ENST00000547018 IGHV3-72A0A0B4J1Y9 119 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 PROP1O75360 226 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 PITX3O75364 302 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 IGHV3-48P01763 117 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 OR9G9P0C7N8 305 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 PAX6P26367 422 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 RAB11AP62491 216 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 MORN2Q502X0 79 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 C1orf229Q6ZS94 237 aaPredicted RBP10.55□□□□□ -0.72
SCAF11-209ENST00000547018 RAB40CQ96S21 281 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 CLCC1Q96S66 551 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 TLN2Q9Y4G6 2542 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 TRGV10A0A0A0MS01 117 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 ZNF727A8MUV8 499 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 SNRPCP09234 159 aaKnown RBP10.55□□□□□ -0.72
SCAF11-209ENST00000547018 CEACAM8P31997 349 aaPredicted RBP10.55□□□□□ -0.72
SCAF11-209ENST00000547018 IGFBPL1Q8WX77 278 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 S1PR3Q99500 378 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.55□□□□□ -0.72
SCAF11-209ENST00000547018 CELSR1Q9NYQ6 3014 aa10.55□□□□□ -0.72
SCAF11-209ENST00000547018 CCL21O00585 134 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 BTF3P20290 206 aaKnown RBP10.54□□□□□ -0.72
SCAF11-209ENST00000547018 GZMHP20718 246 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 MZT1Q08AG7 82 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 KIAA0141Q14154 515 aaPredicted RBP10.54□□□□□ -0.72
SCAF11-209ENST00000547018 ADIPOQQ15848 244 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 AWAT1Q58HT5 328 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 SNX22Q96L94 193 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 A0A1W2PPE2 198 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 K7N7A8 449 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 LMO1P25800 156 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 RPL35P42766 123 aaKnown RBP10.54□□□□□ -0.72
SCAF11-209ENST00000547018 RPS23P62266 143 aaKnown RBP10.54□□□□□ -0.72
SCAF11-209ENST00000547018 HBG1P69891 147 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 HBG2P69892 147 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 UQCC3Q6UW78 93 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 LYPD2Q6UXB3 125 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 CLRN3Q8NCR9 226 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 FAM122AQ96E09 287 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 TMEM204Q9BSN7 226 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 MMP24Q9Y5R2 645 aa10.54□□□□□ -0.72
SCAF11-209ENST00000547018 THBDP07204 575 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 RAB2AP61019 212 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 TFF3Q07654 80 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 EIF2S3LQ2VIR3 472 aaKnown RBP10.53□□□□□ -0.72
SCAF11-209ENST00000547018 GCSAMLQ5JQS6 135 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 CYB561D1Q8N8Q1 229 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 IFT22Q9H7X7 185 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 AURKAIP1Q9NWT8 199 aaPredicted RBP10.53□□□□□ -0.72
SCAF11-209ENST00000547018 STRAPQ9Y3F4 350 aaKnown RBP10.53□□□□□ -0.72
SCAF11-209ENST00000547018 A0A1W2PRD5 423 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 A0A1W2PRF3 423 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 A0A1W2PRM7 423 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 LRRC30A6NM36 301 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 FGF7P21781 194 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 ERVK-16P61578 105 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 RPL31P62899 125 aaKnown RBP10.53□□□□□ -0.72
SCAF11-209ENST00000547018 MRPS11P82912 194 aaKnown RBP10.53□□□□□ -0.72
SCAF11-209ENST00000547018 SRSF7Q16629 238 aaKnown RBP eCLIP10.53□□□□□ -0.72
SCAF11-209ENST00000547018 AVPI1Q5T686 147 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 IGF2-ASQ6U949 168 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 EDARADDQ8WWZ3 215 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 POM121Q96HA1 1249 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 CFAP46Q8IYW2 2715 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 C15orf65H3BRN8 121 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 CT45A1Q5HYN5 189 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 FAM24BQ8N5W8 94 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 CT45A3Q8NHU0 189 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 RHOVQ96L33 236 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 AGMATQ9BSE5 352 aa10.53□□□□□ -0.72
SCAF11-209ENST00000547018 HOXA1P49639 335 aaPredicted RBP10.52□□□□□ -0.72
SCAF11-209ENST00000547018 UBE2G2P60604 165 aa10.52□□□□□ -0.72
SCAF11-209ENST00000547018 HRNRQ86YZ3 2850 aaPredicted RBP10.52□□□□□ -0.72
SCAF11-209ENST00000547018 OR10P1Q8NGE3 313 aa10.52□□□□□ -0.72
SCAF11-209ENST00000547018 SSMEM1Q8WWF3 244 aa10.52□□□□□ -0.72
SCAF11-209ENST00000547018 PBDC1Q9BVG4 233 aa10.52□□□□□ -0.72
SCAF11-209ENST00000547018 SEC11CQ9BY50 192 aa10.52□□□□□ -0.72
SCAF11-209ENST00000547018 PATZ1Q9HBE1 687 aaKnown RBP10.52□□□□□ -0.72
SCAF11-209ENST00000547018 SAA2-SAA4A0A096LPE2 208 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 hCG_1809904A0A1W2PP81 198 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 A0A1W2PR64 198 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 A0A1W2PRV1 198 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 C7orf77A4D0Y5 90 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 RBFOX3A6NFN3 312 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 IFNL4K9M1U5 179 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 ENSAO43768 121 aaKnown RBP10.52□□□□□ -0.73
SCAF11-209ENST00000547018 DFFBO76075 338 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 SAA2P0DJI9 122 aaPredicted RBP10.52□□□□□ -0.73
SCAF11-209ENST00000547018 CD200P41217 278 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 TDGF1P3P51864 188 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 ZNF787Q6DD87 383 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 SSX7Q7RTT5 188 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 ZNF709Q8N972 641 aa10.52□□□□□ -0.73
SCAF11-209ENST00000547018 SLC25A10Q9UBX3 287 aaPredicted RBP10.52□□□□□ -0.73
SCAF11-209ENST00000547018 PRELID3BQ9Y3B1 194 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms