RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 TWSG1Q9GZX9 223 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 HIGD1AQ9Y241 93 aa11.01□□□□□ -0.65
PTCH1-212ENST00000546744 MGST3O14880 152 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 CKS2P33552 79 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 ARF6P62330 175 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 RPL31P62899 125 aaKnown RBP11□□□□□ -0.65
PTCH1-212ENST00000546744 ZXDAP98168 799 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 SMAD4Q13485 552 aaKnown RBP11□□□□□ -0.65
PTCH1-212ENST00000546744 SPINK9Q5DT21 86 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 GNB1LQ9BYB4 327 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 TRGV5A0A0B4J1U4 118 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 SOX8P57073 446 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 UNC119Q13432 240 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 SPATA46Q5T0L3 261 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 AMMECR1LQ6DCA0 310 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 MOB3BQ86TA1 216 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 RNASEH2CQ8TDP1 164 aaKnown RBP11□□□□□ -0.65
PTCH1-212ENST00000546744 CHRNA10Q9GZZ6 450 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 OR51B2Q9Y5P1 312 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 TRAV30A0A087WSZ9 112 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 TMEM189A5PLL7 270 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 DLL1O00548 723 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 MEOX1P50221 254 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 FOXL1Q12952 345 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 SNAI3Q3KNW1 292 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 DCAF10Q5QP82 559 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 FAM169BQ8N8A8 192 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 GDF15Q99988 308 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 OSTCQ9NRP0 149 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 TINAGQ9UJW2 476 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 PILRAQ9UKJ1 303 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 NEUROG3Q9Y4Z2 214 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 TRAV38-1A0A0B4J264 116 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 DEFB108AA8MXU0 73 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 ITGB1BP1O14713 200 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 CEACAM1P13688 526 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 GAS1P54826 345 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 DERL1Q9BUN8 251 aa11□□□□□ -0.65
PTCH1-212ENST00000546744 C17orf51A8MQB3 221 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 ZNF324O75467 553 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-212ENST00000546744 ZNF137PP52743 207 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 HOXA4Q00056 320 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-212ENST00000546744 CENPWQ5EE01 88 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 SPEM1Q8N4L4 309 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 ZNF414Q96IQ9 312 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 HARBI1Q96MB7 349 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 PRDM14Q9GZV8 571 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 IL36RNQ9UBH0 155 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 ZNF257Q9Y2Q1 563 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 LHFPL6Q9Y693 200 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 IGKV1D-42A0A075B6H8 117 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 ATP5LO75964 103 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 IGLV3-21P80748 117 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-212ENST00000546744 PRSS53Q2L4Q9 553 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 INO80CQ6PI98 192 aaPredicted RBP10.99□□□□□ -0.65
PTCH1-212ENST00000546744 VWA8A3KMH1 1905 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 H0YIZ8 118 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 SCTP09683 121 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 GPR183P32249 361 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 ZNF721Q8TF20 911 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 UFC1Q9Y3C8 167 aa10.99□□□□□ -0.65
PTCH1-212ENST00000546744 IGKV1-8A0A0C4DH67 115 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 IZUMO1RA6ND01 250 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 OR11H12B2RN74 326 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 GNG7O60262 68 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 SERF1AO75920 110 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 MC5RP33032 325 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 GAGE1Q13065 139 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 UBE2V1Q13404 147 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 LDLRAD2Q5SZI1 272 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 MIC13Q5XKP0 118 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 OR11H1Q8NG94 326 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 OR11H2Q8NH07 326 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 NPCDR1Q9BY65 106 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 KLF2Q9Y5W3 355 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-212ENST00000546744 TMEM229AB2RXF0 380 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 C5orf67F2Z3F1 127 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 FOXS1O43638 330 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 TMEM177Q53S58 311 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 RASL11AQ6T310 242 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 CACNA1GO43497 2377 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 IGHV3-43A0A0B4J1X8 118 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 LMX1BO60663 402 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 IGHV2-70P01814 119 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 IGHV3-43DP0DP04 118 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 PEBP1P30086 187 aaKnown RBP10.98□□□□□ -0.65
PTCH1-212ENST00000546744 ZXDCQ2QGD7 858 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-212ENST00000546744 C10orf128Q5T292 105 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 LINC00114Q6XXX2 140 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 ASCL5Q7RTU5 278 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 OR51G1Q8NGK1 321 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 SERGEFQ9UGK8 458 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 CEACAM18A8MTB9 384 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 SLC35B1P78383 322 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 MEF2CQ06413 473 aaPredicted RBP10.98□□□□□ -0.65
PTCH1-212ENST00000546744 ZNF525Q8N782 197 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 OR2K2Q8NGT1 345 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 AGMATQ9BSE5 352 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 CYTL1Q9NRR1 136 aa10.98□□□□□ -0.65
PTCH1-212ENST00000546744 C1RLQ9NZP8 487 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms