RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 UBE2KP61086 200 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 MRPS11P82912 194 aaKnown RBP9.81□□□□□ -0.84
CCDC38-202ENST00000546386 DEFA5Q01523 94 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 Q6ZRG5 221 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 FAM222BQ8WU58 562 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 R3HDM4Q96D70 268 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 RITA1Q96K30 269 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 SIRT7Q9NRC8 400 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 ITPR2Q14571 2701 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 CEBPZOSA8MTT3 80 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 VSTM5A8MXK1 200 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 NDUFB3O43676 98 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 GPR137BO60478 399 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 MUC1P15941 1255 aaPredicted RBP9.81□□□□□ -0.84
CCDC38-202ENST00000546386 SRPXP78539 464 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 C3orf36Q3SXR2 165 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 HAPLN4Q86UW8 402 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 THNSL2Q86YJ6 484 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 ABHD12Q8N2K0 398 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 ZNF383Q8NA42 475 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 FAM213BQ8TBF2 198 aa9.81□□□□□ -0.84
CCDC38-202ENST00000546386 LYRM2Q9NU23 88 aaPredicted RBP9.81□□□□□ -0.84
CCDC38-202ENST00000546386 SRRM4A7MD48 611 aaKnown RBP9.8□□□□□ -0.84
CCDC38-202ENST00000546386 CGB3P0DN86 165 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 CGB7P0DN87 165 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 PVALBP20472 110 aaPredicted RBP9.8□□□□□ -0.84
CCDC38-202ENST00000546386 ATP6V0CP27449 155 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 AKR1E2Q96JD6 320 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 FAM210AQ96ND0 272 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 NF1P21359 2839 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 APCP25054 2843 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 A1L4Q6 167 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 CLEC18AA5D8T8 446 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 C9JQL5 133 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 PITX3O75364 302 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 ADH4P08319 380 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 P2RY1P47900 373 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 ELLP55199 621 aaPredicted RBP9.8□□□□□ -0.84
CCDC38-202ENST00000546386 CCL20P78556 96 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 EIF4EBP1Q13541 118 aaPredicted RBP9.8□□□□□ -0.84
CCDC38-202ENST00000546386 SWI5Q1ZZU3 235 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 CLEC18CQ8NCF0 446 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 OR2G3Q8NGZ4 309 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 STOML3Q8TAV4 291 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 SPIN2AQ99865 258 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 SPIN2BQ9BPZ2 258 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 FASNP49327 2511 aaKnown RBP9.8□□□□□ -0.84
CCDC38-202ENST00000546386 HECTD1Q9ULT8 2610 aa9.8□□□□□ -0.84
CCDC38-202ENST00000546386 NKX6-3A6NJ46 265 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 B9A039 149 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 LOXP28300 417 aaPredicted RBP9.79□□□□□ -0.84
CCDC38-202ENST00000546386 HTD2P86397 168 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 CATR1Q13166 79 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 TEX36Q5VZQ5 186 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 PNKDQ8N490 385 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 LRRC20Q8TCA0 184 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 RNF141Q8WVD5 230 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 ITLN2Q8WWU7 325 aaPredicted RBP9.79□□□□□ -0.84
CCDC38-202ENST00000546386 ZNF714Q96N38 554 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 S1PR3Q99500 378 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 PLEKHA2Q9HB19 425 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 TREM1Q9NP99 234 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 UBE2L5PA0A1B0GUS4 154 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 ENSAO43768 121 aaKnown RBP9.79□□□□□ -0.84
CCDC38-202ENST00000546386 FBP1P09467 338 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 AKR1C3P42330 323 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 FGF8P55075 233 aaPredicted RBP9.79□□□□□ -0.84
CCDC38-202ENST00000546386 ARF6P62330 175 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 TNFRSF9Q07011 255 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 BTN1A1Q13410 526 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 LRRC10Q5BKY1 277 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 FAM209AQ5JX71 171 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 C1orf87Q8N0U7 546 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 EDARADDQ8WWZ3 215 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 RHOVQ96L33 236 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 ZNF251Q9BRH9 671 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 MRPL20Q9BYC9 149 aaKnown RBP9.79□□□□□ -0.84
CCDC38-202ENST00000546386 IDI2-AS1Q9NZ38 188 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 LPAR3Q9UBY5 353 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 JPT1Q9UK76 154 aa9.79□□□□□ -0.84
CCDC38-202ENST00000546386 A0A1B0GU03 582 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 hADV38S2A0JD32 116 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 YPEL1O60688 119 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 JTBO76095 146 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 LGALS4P56470 323 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 MIDNQ504T8 468 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 C19orf35Q6ZS72 473 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 LILRB2Q8N423 598 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 OR10X1Q8NGY0 326 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 YPEL2Q96QA6 119 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 C11orf1Q9H5F2 150 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 ITGB1BP2Q9UKP3 347 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 SMCO3A2RU48 225 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 F2RL2O00254 374 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 CT45A6P0DMU7 189 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 CT45A5P0DMU8 189 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 CT45A7P0DMV0 189 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 PJVKQ0ZLH3 352 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 C10orf55Q5SWW7 151 aa9.78□□□□□ -0.84
CCDC38-202ENST00000546386 MOB3BQ86TA1 216 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms