RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TIMP3P35625 211 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 ARR3P36575 388 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 LINC00310P59036 64 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 SAMD10Q9BYL1 202 aa11.91□□□□□ -0.5
SRP54-202ENST00000546080 SCO2A0A1W2PP80 73 aa11.9□□□□□ -0.5
SRP54-202ENST00000546080 CLDN14O95500 239 aa11.9□□□□□ -0.5
SRP54-202ENST00000546080 SELEP16581 610 aa11.9□□□□□ -0.5
SRP54-202ENST00000546080 CD1BP29016 333 aa11.9□□□□□ -0.5
SRP54-202ENST00000546080 THBS3P49746 956 aa11.9□□□□□ -0.5
SRP54-202ENST00000546080 GFRA1P56159 465 aa11.9□□□□□ -0.5
SRP54-202ENST00000546080 SRYQ05066 204 aa11.9□□□□□ -0.5
SRP54-202ENST00000546080 BAGE3Q86Y29 109 aa11.9□□□□□ -0.5
SRP54-202ENST00000546080 BAGE2Q86Y30 109 aa11.9□□□□□ -0.5
SRP54-202ENST00000546080 TUSC5Q8IXB3 177 aa11.9□□□□□ -0.5
SRP54-202ENST00000546080 Q8N7P7 452 aa11.9□□□□□ -0.5
SRP54-202ENST00000546080 TXNDC17Q9BRA2 123 aa11.9□□□□□ -0.5
SRP54-202ENST00000546080 KCNIP1Q9NZI2 227 aa11.9□□□□□ -0.5
SRP54-202ENST00000546080 WDR83OSQ9Y284 106 aa11.9□□□□□ -0.5
SRP54-202ENST00000546080 CNTRLQ7Z7A1 2325 aa11.9□□□□□ -0.5
SRP54-202ENST00000546080 TRAV9-1A0A075B6T8 112 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 C17orf98A8MV24 154 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 IL6RP08887 468 aaPredicted RBP11.89□□□□□ -0.51
SRP54-202ENST00000546080 FOLR3P41439 243 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 C21orf62-AS1Q17RA5 79 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 MCEMP1Q8IX19 187 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 Q8IYB0 196 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 C5orf30Q96GV9 206 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 TMEM204Q9BSN7 226 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 RTL8AQ9BWD3 113 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 IL36BQ9NZH7 164 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 ARL14EPLP0DKL9 152 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 MRPS11P82912 194 aaKnown RBP11.89□□□□□ -0.51
SRP54-202ENST00000546080 OR5I1Q13606 314 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 TDHQ8IZJ6 230 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 OR1L6Q8NGR2 347 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 OCC1Q8TAD7 63 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 GALMQ96C23 342 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 GMPPAQ96IJ6 420 aaPredicted RBP11.89□□□□□ -0.51
SRP54-202ENST00000546080 QTRT1Q9BXR0 403 aaKnown RBP11.89□□□□□ -0.51
SRP54-202ENST00000546080 DEPPQ9NTK1 212 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 SDK2Q58EX2 2172 aa11.89□□□□□ -0.51
SRP54-202ENST00000546080 ZNF407Q9C0G0 2248 aa11.88□□□□□ -0.51
SRP54-202ENST00000546080 C15orf62A8K5M9 175 aa11.88□□□□□ -0.51
SRP54-202ENST00000546080 SH2D1BO14796 132 aa11.88□□□□□ -0.51
SRP54-202ENST00000546080 NXPH2O95156 264 aa11.88□□□□□ -0.51
SRP54-202ENST00000546080 EIF4EBP1Q13541 118 aaPredicted RBP11.88□□□□□ -0.51
SRP54-202ENST00000546080 COL5A1-AS1Q5SY13 56 aa11.88□□□□□ -0.51
SRP54-202ENST00000546080 SPATA46Q5T0L3 261 aa11.88□□□□□ -0.51
SRP54-202ENST00000546080 TAAR6Q96RI8 345 aa11.88□□□□□ -0.51
SRP54-202ENST00000546080 POLDIP2Q9Y2S7 368 aa11.88□□□□□ -0.51
SRP54-202ENST00000546080 CABIN1Q9Y6J0 2220 aa11.88□□□□□ -0.51
SRP54-202ENST00000546080 CFAP54Q96N23 3096 aa11.88□□□□□ -0.51
SRP54-202ENST00000546080 PINLYPA6NC86 204 aa11.88□□□□□ -0.51
SRP54-202ENST00000546080 CXorf1O96002 111 aa11.88□□□□□ -0.51
SRP54-202ENST00000546080 TRIP6Q15654 476 aaKnown RBP11.88□□□□□ -0.51
SRP54-202ENST00000546080 OR52L2PQ8NGH6 319 aa11.88□□□□□ -0.51
SRP54-202ENST00000546080 PRO3102Q9H379 93 aa11.88□□□□□ -0.51
SRP54-202ENST00000546080 FCN1O00602 326 aa11.87□□□□□ -0.51
SRP54-202ENST00000546080 NEURL1O76050 574 aa11.87□□□□□ -0.51
SRP54-202ENST00000546080 BRWD1-AS2P59051 145 aa11.87□□□□□ -0.51
SRP54-202ENST00000546080 DMRTA1Q5VZB9 504 aa11.87□□□□□ -0.51
SRP54-202ENST00000546080 SCCPDHQ8NBX0 429 aa11.87□□□□□ -0.51
SRP54-202ENST00000546080 OR4B1Q8NGF8 309 aa11.87□□□□□ -0.51
SRP54-202ENST00000546080 NINJ1Q92982 152 aa11.87□□□□□ -0.51
SRP54-202ENST00000546080 OPN3Q9H1Y3 402 aaPredicted RBP11.87□□□□□ -0.51
SRP54-202ENST00000546080 MRPS17Q9Y2R5 130 aaKnown RBP11.87□□□□□ -0.51
SRP54-202ENST00000546080 R4GN57 208 aa11.87□□□□□ -0.51
SRP54-202ENST00000546080 TMEM30CPA0ZSE6 113 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 SLC17A3O00476 420 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 MPDU1O75352 247 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 STAG3L2P0CL84 134 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 STAG3L3P0CL85 134 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 OPRK1P41145 380 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 COMPP49747 757 aaPredicted RBP11.86□□□□□ -0.51
SRP54-202ENST00000546080 ERVK11-1P61568 191 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 ZXDAP98168 799 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 Q0VG73 95 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 ZNF146Q15072 292 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 FAM53AQ6NSI3 398 aaPredicted RBP11.86□□□□□ -0.51
SRP54-202ENST00000546080 TMPRSS7Q7RTY8 843 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 WDR86Q86TI4 376 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 SIGLECL1Q8N7X8 197 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 WDFY3Q8IZQ1 3526 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 A8MXE2 369 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 SNURFLB1AK76 121 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 C12orf77C9JDV5 145 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 F2Z2F3 143 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 CCL4P13236 92 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 OTX2P32243 289 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 IER3P46695 156 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 TFPI2P48307 235 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 RAB7AP51149 207 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 KRTDAPP60985 99 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 HLA-DRB5Q30154 266 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 PDLIM3Q53GG5 364 aaPredicted RBP11.86□□□□□ -0.51
SRP54-202ENST00000546080 KRTCAP3Q53RY4 240 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 TCTEX1D1Q8N7M0 179 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 IFI44Q8TCB0 444 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 APH1AQ96BI3 265 aa11.86□□□□□ -0.51
SRP54-202ENST00000546080 FAM103A1Q9BTL3 118 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms