RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 SERPINA6P08185 405 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 LINC00869P0C866 280 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 MPC1LP0DKB6 136 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 CCL3P10147 92 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 HLA-GP17693 338 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 RPS3P23396 243 aaKnown RBP eCLIP2.5□□□□□ -2.01
SNHG1-222ENST00000545308 HTR2BP41595 481 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 XKP51811 444 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 EFNA4P52798 201 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 CMC4P56277 68 aaPredicted RBP2.5□□□□□ -2.01
SNHG1-222ENST00000545308 RAB38P57729 211 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 GRB2P62993 217 aaKnown RBP2.5□□□□□ -2.01
SNHG1-222ENST00000545308 PSPHP78330 225 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 PMVKQ15126 192 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 TRAM1Q15629 374 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 ZNF791Q3KP31 576 aaPredicted RBP2.5□□□□□ -2.01
SNHG1-222ENST00000545308 DEFB134Q4QY38 66 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 C5orf47Q569G3 176 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 YIF1BQ5BJH7 314 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 NCMAPQ5T1S8 102 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 HBMQ6B0K9 141 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 ZFP1Q6P2D0 407 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 CLEC19AQ6UXS0 136 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 CYP4Z1Q86W10 505 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 ZNF695Q8IW36 515 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 BOD1L2Q8IYS8 172 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 SPICQ8N5J4 248 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 ATP6V1C2Q8NEY4 427 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 OR5T1Q8NG75 326 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 OR7G1Q8NGA0 311 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 OR4M2Q8NGB6 313 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 UBALD1Q8TB05 177 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 SFXN5Q8TD22 340 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 KCTD4Q8WVF5 259 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 TSLPQ969D9 159 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 RILPQ96NA2 401 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 AIF1LQ9BQI0 150 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 ZNF649Q9BS31 505 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 UGT2B28Q9BY64 529 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 OR8D2Q9GZM6 311 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 VCXQ9H320 206 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 EXOSC4Q9NPD3 245 aaKnown RBP2.5□□□□□ -2.01
SNHG1-222ENST00000545308 SDHAF3Q9NRP4 125 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 CBLN4Q9NTU7 201 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 ENOPH1Q9UHY7 261 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 C15orf41Q9Y2V0 281 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 WNK1Q9H4A3 2382 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 WNK2Q9Y3S1 2297 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 EXPH5Q8NEV8 1989 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 ARFGEF3Q5TH69 2177 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 A0A1B0GX12 115 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 B4DSR2 109 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 CLDN34H7C241 214 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 APOC4-APOC2K7ER74 178 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 UPK1AO00322 258 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 RTL8CO15255 209 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 TCAPO15273 167 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 PLIN3O60664 434 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 SNAP29O95721 258 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 APOC2P02655 101 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 C8GP07360 202 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 C1GALT1C1LP0DN25 315 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 HIST1H1TP22492 207 aaPredicted RBP2.49□□□□□ -2.01
SNHG1-222ENST00000545308 PSMB6P28072 239 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 PRSS3P35030 304 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 ANP32AP39687 249 aaKnown RBP2.49□□□□□ -2.01
SNHG1-222ENST00000545308 CRATP43155 626 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 ERFP50548 548 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 DYNLT1P63172 113 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 SARNPP82979 210 aaKnown RBP2.49□□□□□ -2.01
SNHG1-222ENST00000545308 CD164Q04900 197 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 PRKCDQ05655 676 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 POU6F1Q14863 301 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 IDNKQ5T6J7 187 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 NANOGP8Q6NSW7 305 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 C4orf22Q6V702 233 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 VN1R4Q7Z5H5 301 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 PRNTQ86SH4 94 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 CCNYL1Q8N7R7 359 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 OR4K17Q8NGC6 315 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 OR6K3Q8NGY3 331 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 SYNPRQ8TBG9 265 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 C10orf105Q8TEF2 133 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 RORBQ92753 470 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 TNFRSF14Q92956 283 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 HGDQ93099 445 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 MRPL48Q96GC5 212 aaKnown RBP2.49□□□□□ -2.01
SNHG1-222ENST00000545308 SMIM8Q96KF7 97 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 QKIQ96PU8 341 aaKnown RBP eCLIP2.49□□□□□ -2.01
SNHG1-222ENST00000545308 RNF5Q99942 180 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 DHRS9Q9BPW9 319 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 TSGA10Q9BZW7 698 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 NXF2Q9GZY0 626 aaKnown RBP2.49□□□□□ -2.01
SNHG1-222ENST00000545308 PARVBQ9HBI1 364 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 PRO0628Q9UI54 55 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 RAB26Q9ULW5 256 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 NOSIPQ9Y314 301 aaKnown RBP2.49□□□□□ -2.01
SNHG1-222ENST00000545308 CHCHD2Q9Y6H1 151 aaPredicted RBP2.49□□□□□ -2.01
SNHG1-222ENST00000545308 DOCK11Q5JSL3 2073 aa2.49□□□□□ -2.01
SNHG1-222ENST00000545308 TRRAPQ9Y4A5 3859 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms