RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 FHITP49789 147 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 HFEQ30201 348 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 ZNF672Q499Z4 452 aaPredicted RBP13.69□□□□□ -0.22
CHFR-224ENST00000545046 LYPD2Q6UXB3 125 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 OR4S2Q8NH73 311 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 SUN5Q8TC36 379 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 DTD1Q8TEA8 209 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 H1FXQ92522 213 aaKnown RBP13.69□□□□□ -0.22
CHFR-224ENST00000545046 UQCC1Q9NVA1 299 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 CEBPZOSA8MTT3 80 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 RNASEK-C17orf49H0YIS7 233 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 NDUFA2O43678 99 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 MMP23AO75900 390 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 DAOP14920 347 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 ZNF273Q14593 569 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 CDSNQ15517 529 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 OR4A16Q8NH70 328 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 DDB2Q92466 427 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 ZNF714Q96N38 554 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 RFNGQ9Y644 331 aa13.69□□□□□ -0.22
CHFR-224ENST00000545046 F8W036 122 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 SIAH2O43255 324 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 RUNX1Q01196 453 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 ARL16Q0P5N6 197 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 TMEM14EPQ6UXP3 125 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 C1orf229Q6ZS94 237 aaPredicted RBP13.68□□□□□ -0.22
CHFR-224ENST00000545046 SLC25A48Q6ZT89 311 aaKnown RBP13.68□□□□□ -0.22
CHFR-224ENST00000545046 SSX9Q7RTT3 188 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 THNSL2Q86YJ6 484 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 ZNF525Q8N782 197 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 MS4A7Q9GZW8 240 aaPredicted RBP13.68□□□□□ -0.22
CHFR-224ENST00000545046 KAAG1Q9UBP8 84 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 FAM96BQ9Y3D0 163 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 PKDREJQ9NTG1 2253 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 ZG16O60844 167 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 OR9G9P0C7N8 305 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 DVL1P1P54792 670 aaPredicted RBP13.68□□□□□ -0.22
CHFR-224ENST00000545046 AKR1C8PQ5T2L2 129 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 TMEM200BQ69YZ2 307 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 ZNF251Q9BRH9 671 aa13.68□□□□□ -0.22
CHFR-224ENST00000545046 TMA7Q9Y2S6 64 aaKnown RBP13.68□□□□□ -0.22
CHFR-224ENST00000545046 DOCK11Q5JSL3 2073 aa13.67□□□□□ -0.22
CHFR-224ENST00000545046 DVL1O14640 695 aa13.67□□□□□ -0.22
CHFR-224ENST00000545046 IFNA17P01571 189 aa13.67□□□□□ -0.22
CHFR-224ENST00000545046 SNCAP37840 140 aa13.67□□□□□ -0.22
CHFR-224ENST00000545046 SLC38A11Q08AI6 406 aa13.67□□□□□ -0.22
CHFR-224ENST00000545046 OR8G2PQ6IF36 304 aa13.67□□□□□ -0.22
CHFR-224ENST00000545046 HEPN1Q6WQI6 88 aa13.67□□□□□ -0.22
CHFR-224ENST00000545046 HAPLN4Q86UW8 402 aa13.67□□□□□ -0.22
CHFR-224ENST00000545046 QTRT1Q9BXR0 403 aaKnown RBP13.67□□□□□ -0.22
CHFR-224ENST00000545046 ADGRG4Q8IZF6 3080 aa13.67□□□□□ -0.22
CHFR-224ENST00000545046 LY86O95711 162 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 C17orf50Q8WW18 174 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 ZDHHC16Q969W1 377 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 RAB39BQ96DA2 213 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 FCN3O75636 299 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 CD5P06127 495 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 CCL3L1P16619 93 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 BTN1A1Q13410 526 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 ATP6V1FQ16864 119 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 LRRC75BQ2VPJ9 315 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.66□□□□□ -0.22
CHFR-224ENST00000545046 LFNGQ8NES3 379 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 OR4C12Q96R67 309 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 CLCC1Q96S66 551 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 SEC11CQ9BY50 192 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 CTSZQ9UBR2 303 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 KALRNO60229 2985 aa13.66□□□□□ -0.22
CHFR-224ENST00000545046 MED19A0JLT2 244 aaPredicted RBP13.65□□□□□ -0.22
CHFR-224ENST00000545046 OR8U8P0C7N1 319 aa13.65□□□□□ -0.22
CHFR-224ENST00000545046 OR2B8PP59922 312 aa13.65□□□□□ -0.22
CHFR-224ENST00000545046 DPPA3Q6W0C5 159 aa13.65□□□□□ -0.22
CHFR-224ENST00000545046 SVBPQ8N300 66 aa13.65□□□□□ -0.22
CHFR-224ENST00000545046 PARD6GQ9BYG4 376 aaPredicted RBP13.65□□□□□ -0.22
CHFR-224ENST00000545046 FBXO7Q9Y3I1 522 aa13.65□□□□□ -0.22
CHFR-224ENST00000545046 SPCS3P61009 180 aa13.65□□□□□ -0.22
CHFR-224ENST00000545046 PEA15Q15121 130 aa13.65□□□□□ -0.22
CHFR-224ENST00000545046 AARDQ4LEZ3 155 aa13.65□□□□□ -0.22
CHFR-224ENST00000545046 SPINK9Q5DT21 86 aa13.65□□□□□ -0.22
CHFR-224ENST00000545046 C10orf91Q5T1B1 145 aa13.65□□□□□ -0.22
CHFR-224ENST00000545046 VKORC1L1Q8N0U8 176 aa13.65□□□□□ -0.22
CHFR-224ENST00000545046 ZNF383Q8NA42 475 aa13.65□□□□□ -0.22
CHFR-224ENST00000545046 OR10P1Q8NGE3 313 aa13.65□□□□□ -0.22
CHFR-224ENST00000545046 TMEM204Q9BSN7 226 aa13.65□□□□□ -0.22
CHFR-224ENST00000545046 TMEM140Q9NV12 185 aa13.65□□□□□ -0.22
CHFR-224ENST00000545046 CARHSP1Q9Y2V2 147 aaKnown RBP13.65□□□□□ -0.22
CHFR-224ENST00000545046 ZZEF1O43149 2961 aa13.64□□□□□ -0.23
CHFR-224ENST00000545046 HRASP01112 189 aa13.64□□□□□ -0.23
CHFR-224ENST00000545046 H2AFB1P0C5Y9 115 aa13.64□□□□□ -0.23
CHFR-224ENST00000545046 ADCYAP1P18509 176 aa13.64□□□□□ -0.23
CHFR-224ENST00000545046 LOXP28300 417 aaPredicted RBP13.64□□□□□ -0.23
CHFR-224ENST00000545046 PPOXP50336 477 aa13.64□□□□□ -0.23
CHFR-224ENST00000545046 ERVFRD-1P60508 538 aa13.64□□□□□ -0.23
CHFR-224ENST00000545046 TLE4Q04727 773 aa13.64□□□□□ -0.23
CHFR-224ENST00000545046 GUK1Q16774 197 aa13.64□□□□□ -0.23
CHFR-224ENST00000545046 OR52E5Q8NH55 327 aa13.64□□□□□ -0.23
CHFR-224ENST00000545046 PINX1Q96BK5 328 aaKnown RBP13.64□□□□□ -0.23
CHFR-224ENST00000545046 PSMG3Q9BT73 122 aaPredicted RBP13.64□□□□□ -0.23
CHFR-224ENST00000545046 PBDC1Q9BVG4 233 aa13.64□□□□□ -0.23
CHFR-224ENST00000545046 EIF5A2Q9GZV4 153 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms